XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AAGGCCTGCTGATGCTTCATAATAAGTTCCAGGCCAGCGAGGCTACAGAG
TGAGACTCTGTCACAAAAATAAATAAATCAATCTGAAGACCACAACTCCA
GCCTCCCTTTGGCCGGAAAGGACACAACCTCTGGATGCATGCTTCCTAAC
TTCATGGCATGTTATTGTTTGGCCAGATGGCCAGCTGAATGACAAAAAAA
ACATAAACAGCAACAGCCAGATAAAAGAATATCCTTCTAAATTCAACCTA
ACAGTTGCACATAATTAGCTTATGATGTTGCAGCCATTCGGGATGCTTTC
ACGTGTCACAACAAAACCATGAAAGCAATTATAACTCATTCTGTTACACG
TCAAGGCTTCCCTGTAAGATCGTGTGGAAGCTGGATGCGAGGTGGTGGGG
GAAGAAGCATAGCGAGATAGCATCAGCAATTATGCTGGACTCTAAAATTG
CACATCTCTCTGTATGTCCATAAGGAAGTCTCACTATTAGCATAGCCCTT
TTCTAATAAGAAGAAAATGAGCTTGCATGTATGAATTCTCCGTGTCTCAG
GCAGGGCATCTGCATTTCAATTCTCTGACAACATTCAGATGAATCAAGCA
ATAGAAAACACCACCACACAAAGACTTGGGTGGGTGGATATGGGTGCTAA
GGATGCAGCCTCTTGGCCAAGAAGTTGCCAATGAGAAATAAAG

GATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTCTTGCCTCTGCTTCCTAGTGTTAGGATTA
AAAATGTGTGTGTGTGTGACCACTCCTGGCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTC
TCTTTCTTTCCATTCTTCTTTTCTTTCTTTCTTTTCCGTTCTTCCTTTCT
TTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCC
CTTACATTCCTTTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCTT
CTTCCTCCTCCACATCCTCCTCTTTCTTCTTCCTTTTCCCCTTCAATGTT
CCCTTGAGAGAGAAATATAGGTGTCCCACTTGCGGAGTGTTCAGCCACTT
ATTCTCATCGCTTTGCTCAGTCATGACTCTCGGTGTGTTCCGTTGACCAC
TGCAAAAAAAAGACGCCTGCGTGTCCATAGCTAACAGCAGATATGATCCG
AAGGATATTCGTGTCCTATATCAAGAAGAGTCTTGCGGGGGTAACTACTA
TGCCTCACTTAATTATTGGTTGTCTTAATAAGATTTTACCCGCATGGACA
CTTATTTCATGGGTCCTTAGATTTAAGTCTGTTCCCGCTCCAGTCAATCG
GGGGTTCTTCTTTACTTAGGGATCGCGACAAATATATTCTGTATTAGCCA
CAAAAGTGTTCTTACTACTCTTCT

Query= MSMg01no380_k18.b1 MSMg01no380_k18.b1 CHROMAT_FILE:
MSMg01no380_k18.b1 PHD_FILE: MSMg01no380_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:49 2005
         (590 letters)



>mm_chr15_92827685_92828674
          Length = 990

 Score = 1060 bits (548), Expect = 0.0
 Identities = 581/594 (97%), Gaps = 4/594 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgcttcataataagttccaggccagcgaggctacagagtgagactctgtcacaa---- 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 197 gatgcttcataataagttccaggccagcgaggctacagagtgagactctgtcacaaaaat 256

                                                                       
Query: 57  aaataaataaatcaatctgaagaccacaactccagcctccctttggccggaaaggacaca 116
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 257 aaataaataaataaatctgaagaccacaactccagcctccctttggccggaaaggacaaa 316

                                                                       
Query: 117 acctctggatgcatgcttcctaacttcatggcatgttattgtttggccagatggccagct 176
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 317 acctctggatgcatgcttcctaacttcgtggcatgttattgtttggccagatggccagct 376

                                                                       
Query: 177 gaatgacaaaaaaaacataaacagcaacagccagataaaagaatatccttctaaattcaa 236
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaatgacaaaaaaaccataaacagcaacagccagataaaagaatatccttctaaattcaa 436

                                                                       
Query: 237 cctaacagttgcacataattagcttatgatgttgcagccattcgggatgctttcacgtgt 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cctaacagttgcacataattagcttatgatgttgcagccattcgggatgctttcacgtgt 496

                                                                       
Query: 297 cacaacaaaaccatgaaagcaattataactcattctgttacacgtcaaggcttccctgta 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cacaacaaaaccatgaaagcaattataactcattctgttacacgtcaaggcttccctgta 556

                                                                       
Query: 357 agatcgtgtggaagctggatgcgaggtggtgggggaagaagcatagcgagatagcatcag 416
           |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 557 agatcgtgtggaggctggatgcgaggtggtgggggaagaagcgtagcgagatagcatcag 616

                                                                       
Query: 417 caattatgctggactctaaaattgcacatctctctgtatgtccataaggaagtctcacta 476
           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 617 caattacgctggactctaaaattgcacatctctctgtatgtccataaggaagtctcgcta 676

                                                                       
Query: 477 ttagcatagcccttttctaataagaagaaaatgagcttgcatgtatgaattctccgtgtc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttagcatagcccttttctaataagaagaaaatgagcttgcatgtatgaattctccgtgtc 736

                                                                 
Query: 537 tcaggcagggcatctgcatttcaattctctgacaacattcagatgaatcaagca 590
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tcaggcagggcgtctgcatttcaattctctgacaacattcagatgaatcaagca 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)