Query= MSMg01no381_f08.b1 MSMg01no381_f08.b1 CHROMAT_FILE:
MSMg01no381_f08.b1 PHD_FILE: MSMg01no381_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:42 2005
(485 letters)
>mm_chr15_21385105_21385991
Length = 887
Score = 818 bits (423), Expect = 0.0
Identities = 471/487 (96%), Gaps = 6/487 (1%)
Strand = Plus / Plus
Query: 3 tggaggatgtatttttctggctttgctaagcagtaaacgtgtagactctgtgggaatctt 62
|||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 203 tggaggatgtgtttttctggctttgctaagcagt-aacgtgtaggctctgtgggaatctt 261
Query: 63 tcttactgagttcagacacatgaatgtatacatggaaataaaggtttatttcaatgttat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcttactgagttcagacacatgaatgtatacatggaaataaaggtttatttcaatgttat 321
Query: 123 tttttagaacggataacagagtttagcttcaaaacattttatatgtgatat-t-tttttt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||| | | ||||
Sbjct: 322 tttttagaacggataacagagcttagcttcaaaacattttatatgtgatatatatatttt 381
Query: 181 tataagccaaagtttcacaaaggcaatgctggcttctctccagctatagttctgctgtaa 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 t-taagccaaagtttcacaaaggcaatgctggcttctctccagctatagttctgctgtaa 440
Query: 241 ccagtagtgatctgtaaggaaatgtgtggagagacattcctcgggtctcaggatccgagt 300
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||
Sbjct: 441 ccagtagtgatctgtaaggaaatttgtggagagacattcctcgggcctcaggatctgagt 500
Query: 301 tgtaatggaccctgctatcagctaggctccagatctctcttctcgtgggg-ctcttctgt 359
|||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 501 tgtaatggaccctgctgtcagctaggctccagatctctcttctcatgggggctcttctgt 560
Query: 360 actgtttgcatttttaaaagaaaaaaattaaagttattaagcatattttactttagaaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgtttgcatttttaaaagaaaaaaattaaagttattaagcatattttactttagaaat 620
Query: 420 agaaacaaaaa-tacttttatgacctaatgttattttctaaaaatactaggcagttgtat 478
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 agaaacaaaaaatacttttatgacctaatgttattttctaaaaatactaggcagtggtat 680
Query: 479 atttccg 485
|||||||
Sbjct: 681 atttccg 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 887
Length adjustment: 10
Effective length of query: 475
Effective length of database: 877
Effective search space: 416575
Effective search space used: 416575
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_f08.g1 MSMg01no381_f08.g1 CHROMAT_FILE:
MSMg01no381_f08.g1 PHD_FILE: MSMg01no381_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:42 2005
(467 letters)
>mm_chr15_21527780_21528644
Length = 865
Score = 824 bits (426), Expect = 0.0
Identities = 457/468 (97%), Gaps = 3/468 (0%)
Strand = Plus / Minus
Query: 1 tctgccattattaaatttcaaaacattgtgggtatatttgctttaattattgttaacatc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 505 tctgccattattaaatttcaaaacattgtgggtatatctgctttaattattgttaacatc 446
Query: 61 atagtgaaattttgcatagatcaagaaaaaatagcattaataaatagattacaaaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atagtgaaattttgcatagatcaagaaaaaatagcattaataaatagattacaaaagaac 386
Query: 121 aaaatgtctacactttaatatgacatgaatgttgacatagtgcttgaagagcctacaagt 180
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 gaaatgtctacactttaatatgacatgaatgttgacatagagcttgaagagcctacaagt 326
Query: 181 ttctcttaaagtgataaacaaacattacaagatacaaagccatttaaagtaaagatcaat 240
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctcttaaaatgataaac--acattacaagatacaaagccatttaaagtaaagatcaat 268
Query: 241 tgttttcctatttatcattataacaatgagaaaaaatgaaccatttatgatacacataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgttttcctatttatcattataacaatgagaaaaaatgaaccatttatgatacacataaa 208
Query: 301 agaacactaaattattaaatttacaaacaaaaaatcttaaactgaatatttttaaaatat 360
||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 207 agaacactaaattattaaatttacaaacaaaaattcttaaacagaatattttaaaaatat 148
Query: 361 ttataaaacgtaatgactaacattagttgagttgtttgtggctatggatgaaaagtttta 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 147 ttataaaacgtaatgactaacattaattgagttgtttgtggctatggatgaaaagtttta 88
Query: 421 atactttggaatcttatgtttttt-tcaccacatttatcaatacagta 467
|||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 87 atactttggaatcttatgttttttctcaccacatttatcaatacagta 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 865
Length adjustment: 10
Effective length of query: 457
Effective length of database: 855
Effective search space: 390735
Effective search space used: 390735
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
