Query= MSMg01no382_k08.b1 MSMg01no382_k08.b1 CHROMAT_FILE:
MSMg01no382_k08.b1 PHD_FILE: MSMg01no382_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:27 2005
(573 letters)
>mm_chr15_72098720_72099692
Length = 973
Score = 781 bits (404), Expect = 0.0
Identities = 416/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 6 ggaattcagaagtaatgcggcttagcacttagctttgttttcttcaaagatcagtgcata 65
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggaattcagaagtaaagaggcttagcacttagctttgttttcttcaaagatcagtgcata 360
Query: 66 atctcatgggaggagacaaatggattctaagcaaatatatcatttttatgaacaattttc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atctcatgggaggagacaaatggattctaagcaaatatatcatttttatgaacaattttc 300
Query: 126 tctgctcttacggtgaaaaactgtaggaaagaagattctgtcaccataagtcattggggt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tctgctcttacggtgaaaaactgtaggaaagaagattctgtcaccataagtcattggggt 240
Query: 186 agtgtggttttgaaggtttttaaaggtcgccatagggctggagagatggctcagtggtta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agtgtggttttgaaggtttttaaaggtcgccatagggctggagagatggctcagtggtta 180
Query: 246 atagtatgtactgctcttgcagaggacccaagtttggttctcagcactcacattgagagg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atagtatgtactgctcttgcagaggacccaagtttggttctcagcactcacattgagagg 120
Query: 306 ctcacaatggtagttaccatctgtaactccagtggattcaatgcccttgtctaactcctt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ctcacaatggtagttaccatctgtaactccagtggattcaatgcccttgtctaactcctt 60
Query: 366 aggcattggcatgtatgtgatagaaaaaaatatacacccaggctcacaaatatacataaa 425
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 59 aggcattggcatgtatgtgataaaaaaaaa-atacacccaggctcacaaatatacataaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_k08.g1 MSMg01no382_k08.g1 CHROMAT_FILE:
MSMg01no382_k08.g1 PHD_FILE: MSMg01no382_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:27 2005
(518 letters)
>mm_chr15_71880438_71881355
Length = 918
Score = 893 bits (462), Expect = 0.0
Identities = 505/528 (95%), Gaps = 14/528 (2%)
Strand = Plus / Plus
Query: 5 ttttataagagttgccttggtcattggtcatggtgtctcttcacagcagtgactaaggta 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttttataagagttaccttggtcattggtcatggtgtctcttcacagcagtgactaaggta 250
Query: 65 gccttctctggtttcctatagatagatgtcaatctcagaccagcccaagccctaagaggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gccttctctggtttcctatagatagatgtcaatctcagaccagcccaagccctaagaggg 310
Query: 125 gtcacattccatggattgccacaaagggccagaccagtacagagaggggtgaaagatctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtcacattccatggattgccacaaagggccagaccagtacagagaggggtgaaagatctt 370
Query: 185 ttctagagtcctgtccagagcagggctgcatatgtatggctctgtcgggatgattcctgg 244
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttctagagtcccgtccagaccagggctgcatatgtatggctctgtcgggatgattcctgg 430
Query: 245 tgggagagcgccccctggtgccagtaggagtaatggttcctgactagatctgtgacctct 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 431 tgggagagcgccccctggtgccagtaggagtaatggttcctgactagagctgtgacctct 490
Query: 305 tccaaggttgtgatctcagatttcttctactgtgtgatcaggcctgtggtgtctgcaaag 364
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 491 tccagggttgtgatctcagatttcttctactgtgtgatcatgcctgtggtgtctgcaaag 550
Query: 365 cagtgatttccccggcggg--------------ggctgggggaaagaggggaaaggacag 410
||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 551 cagtgatttccccggggggtgggggtggggggcggctgggggaaagaggggaagggacag 610
Query: 411 ttccaaatagcagagaaagggaggttaaacactttaagatccggtgtcctctcacccagg 470
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttccaaatagcagaggaagggaggttaaacactttaagatccggtgtcctctcacccagg 670
Query: 471 gccttttctagaagccccttttgtctcaccccctccagttgccctttg 518
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gccttttctagaagccccttttgtctcaccccctccagttgccctttg 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
