Query= MSMg01no387_o24.b1 MSMg01no387_o24.b1 CHROMAT_FILE:
MSMg01no387_o24.b1 PHD_FILE: MSMg01no387_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:08 2005
(383 letters)
>mm_chr15_85585695_85586476
Length = 782
Score = 717 bits (371), Expect = 0.0
Identities = 377/379 (99%), Gaps = 1/379 (0%)
Strand = Plus / Minus
Query: 5 gaattctatgcattcccctctaccagtaagagggcaggcatacctgaggttagggacagc 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaattctatgca-gcccctctaccagtaagagggcaggcatacctgaggttagggacagc 524
Query: 65 catgcacaagccttgaccccagcacggccctatgtgaccttgctctttatttctgctcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 catgcacaagccttgaccccagcacggccctatgtgaccttgctctttatttctgctcac 464
Query: 125 aagtagagctggtccccttcgaaccgtctgctttccttccgtgtttattttgaaaggctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aagtagagctggtccccttcgaaccgtctgctttccttccgtgtttattttgaaaggctg 404
Query: 185 ttctgtcttcctctggcttttacccaacccctcatccccctcctgcttggtagcatcatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttctgtcttcctctggcttttacccaacccctcatccccctcctgcttggtagcatcatc 344
Query: 245 cccacccctccagactctggccataatgctccgtctacttcctaccgcaaggttcacatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cccacccctccagactctggccataatgctccgtctacttcctaccgcaaggttcacatg 284
Query: 305 cagggggcagtgttcgtggtcctgaacgtgaatcctgatcattttactcctgttgacacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cagggggcagtgttcgtggtcctgaacgtgaatcctgatcattttactcctgttgacacc 224
Query: 365 atggctctcaactacccgt 383
|||||||||||||||||||
Sbjct: 223 atggctctcaactacccgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 782
Length adjustment: 9
Effective length of query: 374
Effective length of database: 773
Effective search space: 289102
Effective search space used: 289102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_o24.g1 MSMg01no387_o24.g1 CHROMAT_FILE:
MSMg01no387_o24.g1 PHD_FILE: MSMg01no387_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:08 2005
(251 letters)
>mm_chr15_85402963_85403613
Length = 651
Score = 484 bits (250), Expect = e-141
Identities = 250/250 (100%)
Strand = Plus / Plus
Query: 1 ctgattctcatgcttacatctgcttggatgcctccagggccaggaggctcagtgcctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgattctcatgcttacatctgcttggatgcctccagggccaggaggctcagtgcctccc 260
Query: 61 agagagcaacaatgctggcccaagcttggggatccacactcaagggcaaggtgacggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagcaacaatgctggcccaagcttggggatccacactcaagggcaaggtgacggtgg 320
Query: 121 gtgggtaggggacctgggggaggggcaggctgagttggaagatgaggaaagagagggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgggtaggggacctgggggaggggcaggctgagttggaagatgaggaaagagagggagc 380
Query: 181 ccagagtgcacctgtacccacccccacccatcagccagcctgaggggaggcccccagccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagagtgcacctgtacccacccccacccatcagccagcctgaggggaggcccccagccc 440
Query: 241 cacaccaagg 250
||||||||||
Sbjct: 441 cacaccaagg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
