NNNGGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCTAGTATCTGCTAGCCATTTTCCTTTCTATATCTTATT
CTATGTCTTTTTTTATTATACTTATTTTCCTTCCTATTTTTATTTTATAC
AATATATTTGACCACATTCTTACCCATTTAAATACTTCCAGTAGAACCTT
CCCACCACCTACCTAACAAATTTTATGTTCCTTTTTTCTCTCTCAAAAAT
GACAAAAATTCATCAAACGAACAAAGAAAAGTTCAAACAAAACAGGAAGC
CACACAAAACAAACAAAACCACAAAACAAAAACAAAAAACAAACCAAAGC
AAACAAACAAAATACCCCCCTCCCCCCCAAAAAAATCAAGGCAGAGCAGT
CATGGGCATAGAGCCTGAGCAGGATTGTTGTTGATATACTCAGTGATACA
CCACTGTAGAAAACTAATTTTGCTTTCCTAGCAAGTATCTACTGAGAATA
ATTTCTTAGTTAGGGGTGAGACTTTTTGTGTACTTCTCTCTCTCAGTGTT
GGATTGTGGTCTGTTTATTTGAGTTTTACATTTCTTGTATATGTTCTCAG
CATCCCAGCGAGTTCATATGTGTATCATTTCTGTTTTCTCAGGAGGACAT
GGTTTCTTTGGAGCCATCCACCCCCTCGTGCTTAAAGTCTTTCTTCCTCC
TTTTCCCGATGGAAATTACCTATCGCACAGACTG

NNNNCCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAACCAGGGCTAT
ACAGAGAAACACTGTCTTGGAAAAAAAAATCTGACCCATAATTGTTCCTG
TCTAAAAGAACTGCAGAGATGGAAATGGAGAGGAGCATCGGGAGAAGAAG
ATCCAGTGACAGACCCAAAGGGTGATCCAGCTCAAGGGGAGGCCCCAAGA
CCTGGCACTATTGCAGAGGCTATGGAGCGGTCACAAAAATGGATCTATCA
TGACTGCCTTCTGAAAGACAGCTGAAAGTCATATGCAGATATTTGTGACC
AAACGACAGACAGAAGCTGCTGACCCCTGTTGTTGAATTAGGGAAAGGCT
GGAAGAAGCTGAGGAGGAGGTTGACCCTGTAGGAGGACCAGCAGTCTCAA
TTAACCTGGACCCCAGAGATCTCTCAAACACTGGACCACCAACCAGGCAG
CATACACCAGGTGATATGAGGCCCCCAACACATATATATCAGAGGACTGC
TGAGGTCTGGGTTCAGTCAGAGAAGATGCACCAAATCCTCCAGAGATTGG
AGGCCCCAGATGGTTTAGAGGTGTGGTTGCATGGCTTCAACTCCCTCTTT
CTCTTTAGAGAAGTGGAGCCTCCCATAGATATCAACTAGACTTGCTATAT
CCAGTTGCAGTAAAACTAGAAACATTATCTCCTATTGAGGTTAG

Query= MSMg01no389_i03.b1 MSMg01no389_i03.b1 CHROMAT_FILE:
MSMg01no389_i03.b1 PHD_FILE: MSMg01no389_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:08 2005
         (551 letters)



>mm_chr15_15465496_15466447
          Length = 952

 Score =  642 bits (332), Expect = 0.0
 Identities = 444/508 (87%), Gaps = 53/508 (10%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattttcctttctatatcttattctatgtctt-tttttattatacttattttccttccta 59
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 504 cattttcctttctatatcttattctatgtcttatttttattatacttattttccttccta 445

                                                                       
Query: 60  tttttattttatacaatatatttgaccacattctta-cccatttaaatacttccagtaga 118
           |||| |||||||||||||||||||| |||||||||| ||| ||||||||||||  |||||
Sbjct: 444 ttttgattttatacaatatatttgatcacattcttatccc-tttaaatacttcttgtaga 386

                                                                       
Query: 119 accttcccaccacctacctaacaaattttatgttccttttttc--tctctcaaaaatgac 176
           |||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||
Sbjct: 385 accttcccaccacctacccaacaaattttatgttc--tttttctttctctcaaaaatgac 328

                                                                       
Query: 177 -aaaaattcatcaaacgaacaaagaaaagttcaaacaaaacaggaagccacacaaaac-a 234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 327 aaaaaattcatcaaacgaacaaagaaaagttcaaacaaaacaggaagccacacaaaacaa 268

                                                                       
Query: 235 aacaaaaccacaaaacaaaaac-aaaaaacaaaccaaagcaaacaaacaaaatacc-ccc 292
           ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 267 aacaaaaccacaacacaaaaacaaaaaaacaaaccaaagcaaacaaacaaaataccaccc 208

                                                                       
Query: 293 ctcccc----------cc----------------------------caa---aaaaatca 311
           | ||||          ||                            |||   ||||||||
Sbjct: 207 c-ccccaaaaaaaaaaccaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaaatca 149

                                                                       
Query: 312 aggcagagcagtcatgggcatagagcctgagcaggattgttgttgatatactcagtgata 371
           |||| |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 148 aggctgagcagtcctgggcatagaacctgggcaggattgttgttgatatactcagtgata 89

                                                                       
Query: 372 caccactgtagaaaactaattttgctttcctagcaagtatctactgagaataatttctta 431
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 88  caccactgtagaaaactaattttactttcctagcaagtatctactgagaataatttctta 29

                                       
Query: 432 gttaggggtgagactttttgtgtacttc 459
           ||||||||||||||||||||||||||||
Sbjct: 28  gttaggggtgagactttttgtgtacttc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 952
Length adjustment: 10
Effective length of query: 541
Effective length of database: 942
Effective search space:   509622
Effective search space used:   509622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)