NNNCCCCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCCAAATTAATTTTTTTTTAAAGGTCACCTTTGTCAC
AGTTGCAGTAAAAGCTTAAGAAGGATAAATCATTTCCCTCAATAGAATGA
AAATCACTGTTCTCTTTTGAAACCTAACATTTCCTTGGACAGATATAGGA
CTACCCTACAAAGGCATAATGACACTCCAGGAAGCTAGGCTCATCCTAAG
CCCTGCTGAAGAGATAGGGGGACTAATTAGCCTGTATGGAGATAATGTAC
TTCTCCTTCACAGAGTTCTTGCTCTCTAATACAATAGTTTACATGGTCAC
ATTCTTGTGGCTTCACAAATCTGCCTACCTTCCTGCATTACATATTCAGA
AAAGTGTAATGTTTTCATTGCATGTTTCTACTTCTTTCCCTAACATTTTG
AGATTTCTTTTTCTTTCCCTAAGGCCCCCTTTCCCCCATGTGGCACGATG
TACACCATTTGTCTCATCTTCATGCTGACTTGGCTCTCTGGAAATTTTTG
TCTTTCTCTGCTGCCCCCTTGGGATTTTCTCCTCTTTCTTCCTTGNCACT
TTTGNTTAGNTTTTAAAAATGGTGGTCCTTCCTCGGTATTTTTAAAATTA
ATTTTGAGAAAAGGCCTCCCCTATGAAAACTCCACAGGCCCTAAACCCTC
CTTCACTTTCCCGAGAACTGCCCTTTAAAGGAATGCCCCCCCCCGGCCCC
CCCGGGGAAGGGC

NNNNNNNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGA
ATGGCTGAGAAACACCTGAAAAAATGTTCAGCATCCTTAATCATCAGAGA
AATGCAAATCAAAACAATGCTGAGATTCCATGTCACACCAGTCAGAATGG
CTAAGATCACAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAA
AGAGGGACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACT
CTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGACATAGTACTACCGG
AGGATCTCGCAATACCTCTCCTGGAGCTTATATCCAGAAGATGTTCCAAC
TAGTAAAAAAGAAACATGCTCCACTATGTTCATAGCAGCCTTATTTATAA
TAGCCAGAAGCTGGAAAGATCCCAGATGCCCCTCAACAGAGGAATGGATA
AAAAAAATGTGGTACATTTACACAATGGAGTACTACTTAGCTATTAAAAA
GAATGAATTTATGAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATTA
TCCTGAGTGAGGTACCCACTCACAAAAGAACTCCAATGATATGTACTCCC
TGATAAAGGGGAAATTATCCCCCAACTTTTAATAACCCCCAAATTAATTA
CCAATTGTGAAAAACCCTGAACTCTCCCAATAATGAGGAACCAAATGTGG
ACCCTTTN

Query= MSMg01no390_c22.b1 MSMg01no390_c22.b1 CHROMAT_FILE:
MSMg01no390_c22.b1 PHD_FILE: MSMg01no390_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:01 2005
         (416 letters)



>mm_chr15_21179510_21180323
          Length = 814

 Score =  777 bits (402), Expect = 0.0
 Identities = 412/416 (99%), Gaps = 2/416 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaattaatttttttttaaaggtcacctttgtcacagttgcagtaaaagcttaagaagga 60
           ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 614 caaattaa--tttttttaaaagtcacctttgtcacagttgcagtaaaagcttaagaagga 557

                                                                       
Query: 61  taaatcatttccctcaatagaatgaaaatcactgttctcttttgaaacctaacatttcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 taaatcatttccctcaatagaatgaaaatcactgttctcttttgaaacctaacatttcct 497

                                                                       
Query: 121 tggacagatataggactaccctacaaaggcataatgacactccaggaagctaggctcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tggacagatataggactaccctacaaaggcataatgacactccaggaagctaggctcatc 437

                                                                       
Query: 181 ctaagccctgctgaagagatagggggactaattagcctgtatggagataatgtacttctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctaagccctgctgaagagatagggggactaattagcctgtatggagataatgtacttctc 377

                                                                       
Query: 241 cttcacagagttcttgctctctaatacaatagtttacatggtcacattcttgtggcttca 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cttcacagatttcttgctctctaatacaatagtttacatggtcacattcttgtggcttca 317

                                                                       
Query: 301 caaatctgcctaccttcctgcattacatattcagaaaagtgtaatgttttcattgcatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 caaatctgcctaccttcctgcattacatattcagaaaagtgtaatgttttcattgcatgt 257

                                                                   
Query: 361 ttctacttctttccctaacattttgagatttctttttctttccctaaggccccctt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttctacttctttccctaacattttgagatttctttttctttccctaaggccccctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 814
Length adjustment: 9
Effective length of query: 407
Effective length of database: 805
Effective search space:   327635
Effective search space used:   327635
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)