Query= MSMg01no390_k14.b1 MSMg01no390_k14.b1 CHROMAT_FILE:
MSMg01no390_k14.b1 PHD_FILE: MSMg01no390_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:39 2005
(491 letters)
>mm_chr15_48190450_48191340
Length = 891
Score = 915 bits (473), Expect = 0.0
Identities = 479/481 (99%)
Strand = Plus / Minus
Query: 11 ttgctagtttgttataccaatatatacacaaaagtactgtgagtattaccactaattaaa 70
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 ttgcaagtttgttataccaatatatacacaaaagtactgtgagtattaccactaattaaa 832
Query: 71 tgttacctttattactatcaaggttataaatcttttaattgtgcaatactctaaaacaag 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tgttacctttattactatcaaggttataaatcttttaattgtgcaatactctaaaacaag 772
Query: 131 taatgagtattagaaagttgttattttttacaatagatttcagcaatacatgcaatctga 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 taatgagtattagaaagttgttattttttacaatagatttcagcaatacatgcaatctga 712
Query: 191 ttaaaatataatatttaaaaccatattttgattgattctataatacatacacatttcata 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttaaaatataatatttaaaaccatattttgattgattctataatacatacacatttcata 652
Query: 251 tttccaaaaaatgttggcagtataaagtcattggtttgtagattttatgtaggtaactac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tttccaaaaaatgttggcagtataaagtcattggtttgtagattttatgtaggtaactac 592
Query: 311 cttttttatttcccccaagtcagtaagaataattactgcccaaaagctttttaaattttt 370
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cttttttattccccccaagtcagtaagaataattactgcccaaaagctttttaaattttt 532
Query: 371 attttgttttctttcttaattcaggttatctggaatgaatataccaccaccaattatcag 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 attttgttttctttcttaattcaggttatctggaatgaatataccaccaccaattatcag 472
Query: 431 caacaaaaactggctcagactgcattttgttacagacagcaatcaccgctaccgaggatt 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 caacaaaaactggctcagactgcattttgttacagacagcaatcaccgctaccgaggatt 412
Query: 491 t 491
|
Sbjct: 411 t 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_k14.g1 MSMg01no390_k14.g1 CHROMAT_FILE:
MSMg01no390_k14.g1 PHD_FILE: MSMg01no390_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:39 2005
(518 letters)
>mm_chr15_47980137_47981055
Length = 919
Score = 973 bits (503), Expect = 0.0
Identities = 515/519 (99%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 1 actaaaggaaactgaaatccagatatagtgtatgaaaagtaatctattttctttaaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaaaggaaactgaaatccagatatagtgtatgaaaagtaatctattttctttaaaagg 260
Query: 61 agcaggggaatgtatacctcctggcagatagactgcactccaatagataggctcatacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaggggaatgtatacctcctggcagatagactgcactccaatagataggctcatacca 320
Query: 121 caatgtataacagtactaactagaatgcacagatataaaacaatcaaaaaaa-tctaagg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 caatgtataacagtactaactagaatgcacagatataaaacaatcaaaaaaaatctaagg 380
Query: 180 gtacaaagattttgtgtatgtggaatgagagggtattaatcaaataagttgacaaggtgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtacaaagattttgtgtatgtggaatgagagggtattaatcaaataagttgacaaggtgg 440
Query: 240 taactataatattaacaatccatgaaattctcaaagaattaaccttttaaaatacaaatg 299
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taactataataaaaacaatccatgaaattctcaaagaattaaccttttaaaatacaaatg 500
Query: 300 ttatactcttcttaataaaggctgtgtataagttgatctgtttgtctaatgctatcacat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatactcttcttaataaaggctgtgtataagttgatctgtttgtctaatgctatcacat 560
Query: 360 acaaagaggatatatttagatggaatctgaaaggactttagcagatgttcctttagaacc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaaagaggatatatttagatggaatctgaaaggactttagcagatgttcctttagaacc 620
Query: 420 aacatactactccacagagactatggtaattataaacatatttttgtaggagaggttgct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacatactactccacagagactatggtaattataaacatatttttgtaggagaggttgct 680
Query: 480 actacacagcaaaatttggaattatgtagaatgaatcat 518
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 actacacaacaaaatttggaattatgtagaatgaatcat 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 919
Length adjustment: 10
Effective length of query: 508
Effective length of database: 909
Effective search space: 461772
Effective search space used: 461772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
