Query= MSMg01no394_c08.b1 MSMg01no394_c08.b1 CHROMAT_FILE:
MSMg01no394_c08.b1 PHD_FILE: MSMg01no394_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:25 2005
(378 letters)
>mm_chr15_99658241_99659018
Length = 778
Score = 642 bits (332), Expect = 0.0
Identities = 362/372 (97%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 7 gaattcaattcctttcaaccacgtggtggctcacaaccatctgtaacgggatccgacttc 66
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 206 gaattcaattcccagcaaccacgtggtggctcacaaccatctgtaacgggatccaacttc 265
Query: 67 tggtgtgtctgaagacagctacagtgtactcatatgcataaaat-aaataaataaatctt 125
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 266 tggtgtgtctgaagacagctacagtgtactcatatgcataaaataaaaaaaataaatctt 325
Query: 126 aaaaaacaaaatgaaacgatacaaggtctcacctaatggtctaatctggacttccaattg 185
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaaaacaaaatgaaacaacacaaggtctcacctaatggtctaatctggacttccaattg 385
Query: 186 tgatcctgcttcaacacgtgtgcaccactgtaacctggttttatctggtgctggcattga 245
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgatcctgcttcaactcgtgtgcaccactgtaacctggttttatctggtgctggcattga 445
Query: 246 gcccagctggacactggggaatcactctacccagagcgccacatctccagcagaacagat 305
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 446 gcccagctggacactggggaatcactctacccagagctccacatctccagcagaacagat 505
Query: 306 tttacttaacaaggagaaagagattttttttcaaaagcaagcatgctacactgaggaggg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttacttaacaaggagaaagagattttttttcaaaagcaagcatgctacactgaggaggg 565
Query: 366 gatggggagtgg 377
||||||||||||
Sbjct: 566 gatggggagtgg 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_c08.g1 MSMg01no394_c08.g1 CHROMAT_FILE:
MSMg01no394_c08.g1 PHD_FILE: MSMg01no394_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:25 2005
(391 letters)
>mm_chr15_99821144_99821934
Length = 791
Score = 733 bits (379), Expect = 0.0
Identities = 388/391 (99%)
Strand = Plus / Minus
Query: 1 ttcctgtagacctgggtggctttgagttcacagagatcctcctgtctttacctcctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttcctgtagacctgggtggctttgagttcacagagatcctcctgtctttacctcctggga 479
Query: 61 ttaaaggcaaggcatgtgccactatgcctggcttgaagtaaattaaaaagaaacaaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttaaaggcaaggcatgtgccactatgcctggcttgaagtaaattaaaaagaaacaaaaac 419
Query: 121 aaacaaacaaaaaaggctaaataaggtggacagcactttgggaaaagccttctagattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaacaaacaaaaaaggctaaataaggtggacagcactttgggaaaagccttctagattta 359
Query: 181 gccatatctgtataccaacatacacttgcacacagacaaccatggagcaagctttcaata 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 358 gccatatctgtataccaacatacacttggacacagacaaccatggagcaagctttcaata 299
Query: 241 agacaaaaacaaaacaaaacaaagaaaaaacaaatcaaacccaaaaagtatgaataaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agacaaaaacaaaacaaaacaaagaaaaaacaaatcaaacccaaaaagtatgaataaaaa 239
Query: 301 ttctaagatgctcaattaagaaataaatccacaaccaggcatggtggttcacacctttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttctaagatgctcaattaagaaataaatccacaaccaggcatggtggttcacacctttaa 179
Query: 361 tcccagcactagggagaaagggacagggaga 391
||||||||||||||||||||| ||||||||
Sbjct: 178 tcccagcactagggagaaaggttcagggaga 148
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
