Query= MSMg01no397_a18.b1 MSMg01no397_a18.b1 CHROMAT_FILE:
MSMg01no397_a18.b1 PHD_FILE: MSMg01no397_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:20 2005
(440 letters)
>mm_chr15_42968346_42969184
Length = 839
Score = 830 bits (429), Expect = 0.0
Identities = 435/437 (99%), Gaps = 1/437 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctttctccctttattatataatgtgatatatttaagatcatccagagatttta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctttctccctttattatataatgtgatatatttaagatcatccagagatttta 263
Query: 64 ttcactctataaataccaagacttacaagtaatacagtttcaggggactgaggcagaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcactctataaataccaagacttacaagtaatacagtttcaggggactgaggcagaata 323
Query: 124 gtctgacccatatgtaactgcaatgcaatattatctgaattatgttattcatttacccta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtctgacccatatgtaactgcaatgcaatattatctgaattatgttattcatttacccta 383
Query: 184 gacatcaaaagctagccattttgtctgtatatacagtcctgacatatcgtcctaaacagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacatcaaaagctagccattttgtctgtatatacagtcctgacatatcgtcctaaacagt 443
Query: 244 aacattttttttcctccactgtcataagtgagttgcagaggagacatgaacgatttgcta 303
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 aacattttttt-cctccactgtcatgagtgagttgcagaggagacatgaacgatttgcta 502
Query: 304 actgttgactgtatccagacagccacacagtcaaactccaggatatatatatccatatat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgttgactgtatccagacagccacacagtcaaactccaggatatatatatccatatat 562
Query: 364 atggttggaattaaactgtgtaatataaaacacagccacatacaacttctctcccttcac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atggttggaattaaactgtgtaatataaaacacagccacatacaacttctctcccttcac 622
Query: 424 ttcaccatctctattcg 440
|||||||||||||||||
Sbjct: 623 ttcaccatctctattcg 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 839
Length adjustment: 9
Effective length of query: 431
Effective length of database: 830
Effective search space: 357730
Effective search space used: 357730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_a18.g1 MSMg01no397_a18.g1 CHROMAT_FILE:
MSMg01no397_a18.g1 PHD_FILE: MSMg01no397_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:20 2005
(298 letters)
>mm_chr15_43099929_43100627
Length = 699
Score = 567 bits (293), Expect = e-166
Identities = 296/297 (99%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 1 aaataataaaatttcttaaaatttatgtagtattcattaaaaaattgtctcattttatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaataataaaatttcttaaaatttatgtagtattcattaaaaaattgtctcattttatac 438
Query: 61 cataaaagatttgagctatgtagaagctgttttcttttggcatattgttacttagtgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cataaaagatttgagctatgtagaagctgttttcttttggcatattgttacttagtgcaa 378
Query: 121 agaaaagaagactagatgttaattatattttcttgatttagatacagccattaaaaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agaaaagaagactagatgttaattatattttcttgatttagatacagccattaaaaatct 318
Query: 181 caggtgtttaaaagtttagtagcaaaaatgaaaatcttggttttgattttgatgaaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caggtgtttaaaagtttagtagcaaaaatgaaaatcttggttttgattttgatgaaaatg 258
Query: 241 acatgttttagtttagttatttgtgttttttccatttctaga-ttttttttttctgg 296
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 257 acatgttttagtttagttatttgtgttttttccatttctagatttttttttttctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 699
Length adjustment: 9
Effective length of query: 289
Effective length of database: 690
Effective search space: 199410
Effective search space used: 199410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
