NNNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATCATTTTCCTAGCTGAGTAGTATTCCATTGTGAAAATATA
TCACATTTTCTGTATCCATTCCTTGGTTGAGGGACATCTGGGTTCAGCTT
CTGGTTATTATAAGTAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTT
ATTACATGTTGGAACATCTTCTGGGTATATGCCCAGGAGTGGTATAGCTG
GGTCATCAGGTAGTGCTATGTCCAATTTTCTGAGGAACTGCCAAACTGAT
TCACATTGTGGTTGTACCAACTCGCAGTCCCACCAGCAATTGAGGAGACT
GAGTTGACTTCTTACAACACTTGCCTCTCTCTCTGGCTGCTTGCTTAGTA
ATACACACCGCCACTCATCTGTGGCCAGTCTCTTCACACCACCCATCTGG
GGTCCCTCATCTCTTCACCTGCATATCTGTAATGCCAGAGAAGAAAACTT
ACTAAGAATTGGTCACATTGTCTACACAGGGCTACTTTCATGTTCAGTAT
CTCATAAACTGGCTCCCCATAGGTTCTGTGACTTCTTTTTGGTGTAAAGA
GCATCAAACAAAGATGTTGACCAAGTCGATTGAGCCTATAACGATGAGCC
AATTTTACATTTAAAGAATTTTCACTAACCCTTCCTCATGTTTTTATGTT
GTGCTTAGGGATATTTATAGCTACCACACCA

NTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGTTTAGTTCTGTACTTCT
GTACCCCATTTTTTTTAGTTGATTATCTGTTTATTTTTTGGAGTCAAATT
TCTTGAGTTCTTTATATATTTTGGATATTAGCCCTCTGTCAGATGAAGGG
TTAGTGCAGTTCTTTTCCCAATCTGTAGGCTGCCATTTTATCTTATTGAC
GATATCCTTTTCCTTACAGAAGCTTTTCAGTTTCACGAGGTCCTATTTAT
TAATTCTTTATATTTATTTTCTTCTTCATTTAATGCCTTTACCTGTTTGA
ATGTATTTTTCTGTATTTCCTTAAGGGATTTATTCATGTCCTCTCTAAAG
GCCTCTATCATCTTTATAAGATTGGATTTAAGACCCTCTTCTTGTGCTTC
AGTTTCATTAGGAAATCCATGGTTTGTTGTAGGATAACTGGGCTCAGATG
GTGCCATATTGCCCTCAGTCTTGGTGTCTGTGTTCTTATGTTGTCTTTTA
GGCACCCAGTGTTGGCTGGATAATCCTGGTGTTAGCAGGACTTCGTGGTT
ATATTTGTTGAGCTGCGCTCCCGACCATACACCACGAGTTTCTTGTTCTC
TGTTGCGTTGTGCCTCACCATTACTTCCCTTCCCTCTTTGCGGTTCAGTT
CCGATTCCCCTGTCTTTTCTTCTTTTTT

Query= MSMg01no398_d17.b1 MSMg01no398_d17.b1 CHROMAT_FILE:
MSMg01no398_d17.b1 PHD_FILE: MSMg01no398_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:54 2005
         (601 letters)



>mm_chr15_13305915_13306915
          Length = 1001

 Score =  965 bits (499), Expect = 0.0
 Identities = 502/503 (99%)
 Strand = Plus / Minus

                                                                        
Query: 99   cttctggttattataagtaaggctgctatgaacatagtggagcatgtgtccttattacat 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 cttctggttattataagtaaggctgctatgaacatagtggagcatgtgtccttattacat 942

                                                                        
Query: 159  gttggaacatcttctgggtatatgcccaggagtggtatagctgggtcatcaggtagtgct 218
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 941  gttggaacatcttctgggtatatgcccaggagtggtatagctgggtcctcaggtagtgct 882

                                                                        
Query: 219  atgtccaattttctgaggaactgccaaactgattcacattgtggttgtaccaactcgcag 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881  atgtccaattttctgaggaactgccaaactgattcacattgtggttgtaccaactcgcag 822

                                                                        
Query: 279  tcccaccagcaattgaggagactgagttgacttcttacaacacttgcctctctctctggc 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821  tcccaccagcaattgaggagactgagttgacttcttacaacacttgcctctctctctggc 762

                                                                        
Query: 339  tgcttgcttagtaatacacaccgccactcatctgtggccagtctcttcacaccacccatc 398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761  tgcttgcttagtaatacacaccgccactcatctgtggccagtctcttcacaccacccatc 702

                                                                        
Query: 399  tggggtccctcatctcttcacctgcatatctgtaatgccagagaagaaaacttactaaga 458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701  tggggtccctcatctcttcacctgcatatctgtaatgccagagaagaaaacttactaaga 642

                                                                        
Query: 459  attggtcacattgtctacacagggctactttcatgttcagtatctcataaactggctccc 518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641  attggtcacattgtctacacagggctactttcatgttcagtatctcataaactggctccc 582

                                                                        
Query: 519  cataggttctgtgacttctttttggtgtaaagagcatcaaacaaagatgttgaccaagtc 578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581  cataggttctgtgacttctttttggtgtaaagagcatcaaacaaagatgttgaccaagtc 522

                                   
Query: 579  gattgagcctataacgatgagcc 601
            |||||||||||||||||||||||
Sbjct: 521  gattgagcctataacgatgagcc 499


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)