Query= MSMg01no401_o08.b1 MSMg01no401_o08.b1 CHROMAT_FILE:
MSMg01no401_o08.b1 PHD_FILE: MSMg01no401_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:38 2005
(312 letters)
>mm_chr15_45348159_45348869
Length = 711
Score = 468 bits (242), Expect = e-136
Identities = 299/328 (91%), Gaps = 21/328 (6%)
Strand = Plus / Plus
Query: 1 aattgaaaaatgctagtatattatataatatatttacatcatcagattctcccctgcttc 60
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 185 aattgaaaaacgctagtatattatctaatatatttacatcatcagattctcccctgcttc 244
Query: 61 tgagatttctcatttctc---c-ctctctctctccctccctctctctctctttttctctc 116
|||||||||||||||||| | ||||||||||| ||| |||||||||||| | ||||||
Sbjct: 245 tgagatttctcatttctctctctctctctctctctctctctctctctctctctctctctc 304
Query: 117 tctc------tctctctctc------tctctctctctctcataacctactaagtacattt 164
|||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 305 tctctttctgtctctctctctttctgtctctctctctctcataacctactaagtacattt 364
Query: 165 agtgctgcaagttttatgtgtgattagggcttgtgattttattaaacttgtgattaaata 224
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 365 agtgctgcaagttttatgtgtgattagggcttgtgatttaattaaacttgtgattaaata 424
Query: 225 aacaagtttacctattatcatgaaaatctatagagaaaatcaattctttttttcttagca 284
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 425 aacaagtttacctattatcatgaaaatctatagagaaaatcaattctttttt-ctcagca 483
Query: 285 gccattgactatctataattcttcattt 312
|||||||||||| ||||||||||||
Sbjct: 484 gccattgactat----aattcttcattt 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 711
Length adjustment: 9
Effective length of query: 303
Effective length of database: 702
Effective search space: 212706
Effective search space used: 212706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_o08.g1 MSMg01no401_o08.g1 CHROMAT_FILE:
MSMg01no401_o08.g1 PHD_FILE: MSMg01no401_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:38 2005
(318 letters)
>mm_chr15_45501574_45502291
Length = 718
Score = 551 bits (285), Expect = e-161
Identities = 313/329 (95%), Gaps = 11/329 (3%)
Strand = Plus / Minus
Query: 1 ggtggattgtctgtcttct-----------gaacatttcctggatgctggggagctgggc 49
||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 551 ggtggattgtctgtcttctgtaccatccaggagcatttcctggatgctggggagctgggc 492
Query: 50 atctgtaggtttcacatgggaggtttgcacccaggcagcaataccatcgatcttgagggc 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atctgtaggtttcacatgggaggtttgcacccaggcagcaataccatcgatcttgagggc 432
Query: 110 tgtgagagtggttaacagcaccaggaatggcctcttccaccagtgttccagcaactgtgc 169
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 431 tgtgagagtggttaacagcaccaggaatggcctcttccatcagggttccagcaactgtgc 372
Query: 170 atgaggcctcctaacacagtcacaagtgaggggcctctggcatctctgaggcatttaagg 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atgaggcctcctaacacagtcacaagtgaggggcctctggcatctctgaggcatttaagg 312
Query: 230 cagacagtttggggaaaatctcatgttgttctgactgaagggtttggagactgaagaaga 289
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cagacagtgtggggaaaatctcatgttgttctgactgaagggtttggagactgaagaaga 252
Query: 290 ggttcctattagtgagttaggatatttcc 318
||||||||||||||||||| |||||||||
Sbjct: 251 ggttcctattagtgagttaagatatttcc 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
