Query= MSMg01no406_l06.b1 MSMg01no406_l06.b1 CHROMAT_FILE:
MSMg01no406_l06.b1 PHD_FILE: MSMg01no406_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:06 2005
(411 letters)
>mm_chr15_4956526_4957336
Length = 811
Score = 748 bits (387), Expect = 0.0
Identities = 405/411 (98%)
Strand = Plus / Minus
Query: 1 tctaaagaattttttattctttcattgaaagcttttcttagaaacatttcatcatgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tctaaagaattttttattctttcattgaaagcttttcttagaaacatttcatcatgaaat 552
Query: 61 caagttttttttaccccaaaagtcacttttaaccactgtctgatgtatgcatgttatcag 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 551 caagttttttttaccccaaaagtcagttttaaccactgtctgatgtatgcatgttatcag 492
Query: 121 atttttaccagtttccatgttcctaaaagaacagtggtctcttcccctgcttgctttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atttttaccagtttccatgttcctaaaagaacagtggtctcttcccctgcttgctttaat 432
Query: 181 aacttcacttggcactgggattgttttaattagctctgttcccagtctttcttatgattg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aacttcacttggcactgggattgttttaattagctctgttcccagtctttcttatgatta 372
Query: 241 tgttttgttctcaaaattcagtgacatctctttgtggctcacacacgaaacatgtcttca 300
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agctttgacctcaaaattcagtgacatctctttgtggctcacacacgaaacatgtcttca 312
Query: 301 taaggatgctctcaatgcttggagttcaacttctaatgagaaatttttattcttaaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 taaggatgctctcaatgcttggagttcaacttctaatgagaaatttttattcttaaattc 252
Query: 361 tagatctttaagtttaaaatcatgagagtctgcttgagtgtccactgtgca 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tagatctttaagtttaaaatcatgagagtctgcttgagtgtccactgtgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_l06.g1 MSMg01no406_l06.g1 CHROMAT_FILE:
MSMg01no406_l06.g1 PHD_FILE: MSMg01no406_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:06 2005
(387 letters)
>mm_chr15_4767594_4768381
Length = 788
Score = 681 bits (352), Expect = 0.0
Identities = 379/388 (97%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 1 ttcacactctgatattaatattaatatggcaatttagtacaataggtgttacgagctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ttcacactctgatattaatattaatatggcaatttagtacaataggtgttaagagctact 260
Query: 61 aataaaattatcatcaggaagcagagagcagcagccgagcatattaaatacctggaattt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataaaattatcaccaggaagcagagagcagcagccgagcatattaaatacctggaattt 320
Query: 121 agattgggagtctctggctctgtcctaaaagattaaataaattctaggtcaaaggtaaga 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattgggagtctccggctctgtcctaaaagattaaataaattctaggtcaaaggtaaga 380
Query: 181 agtttctcctctgaggctaatgaagatgagtgctaagcatctgtgtgtgttgcctgggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtttctcctctgaggctaatgaagatgagtgctaagcatctgtgtgtgttgcctgggtg 440
Query: 241 gctgattatt-gttcggttctttttaaatatagattttgagtctgttgactgtaacatgc 299
||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 gctgaaaattagatcggttctttttaaatatagattttgagtctgttgactgtaatatgc 500
Query: 300 tgacaaaataagtgacctccccgactgttaaattttgttaggatcagagtcactgaaggc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacaaaataagtgacctccccgactgttaaattttgttaggatcagagtcactgaaggc 560
Query: 360 acttgatctcaaatttcaagtactctag 387
|| |||||||||||||||||||||||||
Sbjct: 561 acatgatctcaaatttcaagtactctag 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 788
Length adjustment: 9
Effective length of query: 378
Effective length of database: 779
Effective search space: 294462
Effective search space used: 294462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
