CGGGCGATCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTGTTTACCTCTGTACCCCATTTTTAATGGAATTATT
TGAATTTCTGGAGTTCAGGTAGAATGCAGATCTTAAAGCCCACCCCCACA
ATGACACACTTCCTCCTACAAGGCCACATCTACTCCAAAAGGCCACCCCT
CCTAATAGTGCCACTCACTGGGTCAAGCTTATTCAAACCATCACAGAAAA
CAAATTGTCAATCTGAAAAGGAAACAGATAAATAAACATATAAGTTGTGA
AGATAGAGAATAAATGAAAATATTTTGTTACTGTTTGTCTACCAGCAATA
TAAATGCGATTATAATCCACCAATCATGATGACATTAAATAAGCCAAGGT
TTTTCTTCCTTCTTCCTTGTCTTCCTCATTCATTTTATTTTCCTCTCCCT
TCTAGAATACATTCATTTTCTTTCTTCTTTCATTCACTAACTACAGGCAA
TAAATAGTGAATAAAACTATCAGACAATACTATTGTAATATATTTAACAT
TAACTATGTAGGCAAGGCTCAGTCTATAAAGTATTTGCATGAGGATCTGA
GTAAAGTTCCCTGTCCATGGCAATCCCAGTACTGGAAGCCTATATGACTA
ATTACCTTATGTTCGAAGGCCAGCCTACTTTATTTATATTGCACATTCTG
GACAGGTAATACAGCCCCTCTCCAAATTGCATTATACCT

NNNCCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTATCAGAAATTCTGGAAGCC
CAAACCTTGAAACCTTGATGGCACACTTTTTTTTTTTAGATGTGAACAAA
AAAAAGTAACTGTCAAATCAGAATCTTATTATTGGAAAACATGTTCTTTA
AGAATGAGGATAGAATTAAACCATTCTCATATAAAGAAAAATACTGTTAA
ACATACCTATCTTAAAAGAATGTCTGAAATTATGTATTTTGAACATGAAT
AAATGATAAAAAAGAAATTTTATGATTTTAAGAAGGGGAGACTAATTCAA
TGGCTTTTTGGTTCTATTTACTTTTTTTTTTTTTTTTAAGACAGAGTTTC
TCTGTATAGCCCTGGCTGTCCTGGAACTCATTCTGTAGACCAGGCTGGCC
TCGAACTCAGAAATCTGCCTGCCNTCTGCCTTCCCACCCCTNTCCTANTC
CCTCCCCCCCCCTAGGGCTTGGAATTACGGCGTTCCCCCCCATGCCTGGC
CCATTGATTCTTCCTAAATATGCCTTATACACCACGCGTTACACTATTCC
TTTATTGTTCTCTACCTCCTTTTTTAACGGTATATTCATCACCATCCCCG
CCTTCCTCTTTAACTTGTTTCGTTTTCCTTCCTTCGCTCCTCTACTATAT
CCCCCCTTTCCCTCATTTTTTGCCATTCCTTCCCTTTTTTCCCTCCCTTT
TCTCC

Query= MSMg01no410_n09.b1 MSMg01no410_n09.b1 CHROMAT_FILE:
MSMg01no410_n09.b1 PHD_FILE: MSMg01no410_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:41 2005
         (480 letters)



>mm_chr15_33188706_33189585
          Length = 880

 Score =  905 bits (468), Expect = 0.0
 Identities = 477/480 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccccatttttaatggaattatttgaatttctggagttcaggtagaatgcagatcttaaag 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ccccatttttaatggagttatttgaatttctggagttcaggtagaatgcagatcttaaag 788

                                                                       
Query: 61  cccacccccacaatgacacacttcctcctacaaggccacatctactccaaaaggccaccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cccacccccacaatgacacacttcctcctacaaggccacatctactccaaaaggccaccc 728

                                                                       
Query: 121 ctcctaatagtgccactcactgggtcaagcttattcaaaccatcacagaaaacaaattgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ctcctaatagtgccactcactgggtcaagcttattcaaaccatcacagaaaacaaattgt 668

                                                                       
Query: 181 caatctgaaaaggaaacagataaataaacatataagttgtgaagatagagaataaatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 caatctgaaaaggaaacagataaataaacatataagttgtgaagatagagaataaatgaa 608

                                                                       
Query: 241 aatattttgttactgtttgtctaccagcaatataaatgcgattataatccaccaatcatg 300
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aatataatgttactgtttgtctaccagcaatataaatgcgattataatccaccaatcatg 548

                                                                       
Query: 301 atgacattaaataagccaaggtttttcttccttcttccttgtcttcctcattcattttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 atgacattaaataagccaaggtttttcttccttcttccttgtcttcctcattcattttat 488

                                                                       
Query: 361 tttcctctcccttctagaatacattcattttctttcttctttcattcactaactacaggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttcctctcccttctagaatacattcattttctttcttctttcattcactaactacaggc 428

                                                                       
Query: 421 aataaatagtgaataaaactatcagacaatactattgtaatatatttaacattaactatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aataaatagtgaataaaactatcagacaatactattgtaatatatttaacattaactatg 368


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)