Query= MSMg01no411_p18.b1 MSMg01no411_p18.b1 CHROMAT_FILE:
MSMg01no411_p18.b1 PHD_FILE: MSMg01no411_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:12 2005
(610 letters)
>mm_chr15_11922781_11923790
Length = 1010
Score = 1156 bits (598), Expect = 0.0
Identities = 607/610 (99%)
Strand = Plus / Plus
Query: 1 gtctaatgaagcatttctgttgactcttggttactagaggtgctcaatggaggacttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctaatgaagcatttctgttgactcttggttactagaggtgctcaatggaggacttgct 260
Query: 61 tagtctgagctgggtccctaatcctgagggtgaggcagaaggacaaaagtacaaggtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtctgagctgggtccctaatcctgagggtgaggcagaaggacaaaagtacaaggtcag 320
Query: 121 cccaacaacttactgagaccctgttgcaaataaaaagtaagaagaaggctaaagatatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaacaacttactgagaccctgttgcaaataaaaagtaagaagaaggctaaagatatag 380
Query: 181 caaggacttgcctaggatgcactgggctgccaggctgaaccccaagtacaacacaaagac 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagtacttgcctaggatgcactgggctgccaggctgaaccccaagtacaacacaaagac 440
Query: 241 ctcttaaatctgatgtatgtcctgcaaatgagactagaatctaatattctactcaaggaa 300
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ctcttaaatctgatgtaagtcctgcagatgagactagaatctaatattctactcaaggaa 500
Query: 301 tccatcagtcatttatctttacaaaattacccttgtagattctctcacattctgagccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccatcagtcatttatctttacaaaattacccttgtagattctctcacattctgagccca 560
Query: 361 gcattggtaacaccatcccagcgtcccacccacccccaccccccagggaaatcccaggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcattggtaacaccatcccagcgtcccacccacccccaccccccagggaaatcccaggtg 620
Query: 421 tttggagaagtctaggatgcatagcaaaacctactttaaaagactgacaggcctttccct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttggagaagtctaggatgcatagcaaaacctactttaaaagactgacaggcctttccct 680
Query: 481 tcaaaactcaatgtcagcattatagagcaattaatgcaccatacattttgttctataaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaaaactcaatgtcagcattatagagcaattaatgcaccatacattttgttctataaaa 740
Query: 541 gaacttggtagagtaaaagttacctttttttcaacttcgctgtccgaatcactgcctgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaacttggtagagtaaaagttacctttttttcaacttcgctgtccgaatcactgcctgaa 800
Query: 601 gagcttgaag 610
||||||||||
Sbjct: 801 gagcttgaag 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_p18.g1 MSMg01no411_p18.g1 CHROMAT_FILE:
MSMg01no411_p18.g1 PHD_FILE: MSMg01no411_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:12 2005
(590 letters)
>mm_chr15_12049254_12050247
Length = 994
Score = 932 bits (482), Expect = 0.0
Identities = 513/526 (97%), Gaps = 9/526 (1%)
Strand = Plus / Minus
Query: 71 cagtttaaaaaaatctacttaaaaaaaaaaaaagacttattttacttctctgagtccact 130
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 994 cagttttaaaaaatctactt-aaaaaaaaaaaagacttattttacttctctgagtccact 936
Query: 131 gtagctgtcactgccacagcagaagagggcactggatcccattacagatggttgtgggcc 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 935 gtagctgtcactgccacagcagaagagggcactggatcccattacagatggttgtgagcc 876
Query: 191 actatgtgcttgctgggaattgagctcaggacctctaggaagaggaggtcagtgctctta 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 actatgtgcttgctgggaattgagctcaggacctctaggaagaggaggtcagtgctctta 816
Query: 251 accactgagccatctctctagaaccaggatttaccaagcttacttaagctggtattcaac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 accactgagccatctctctagaaccaggatttaccaagcttacttaagctggtattcaac 756
Query: 311 attcttaaaatactgattggattgaaataattttaaaatctataggcctgcattttgggg 370
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 755 attcttaaaatactgattggattgaaataattttaaaatctatagccctgcattttgggg 696
Query: 371 ----aaaaaaaaaaaaaaacctttaaaaactccaaacactcctgctcccaattttcagta 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaaaaaaaaaaaaaaaaaacctttaaaaactccaaacactcctgctcccaattttcagta 636
Query: 427 cctaaatagttaaaatgcaaatctgtcattcattgaatgctaaaaaaaaacagaaaaata 486
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 635 cctaaatagttaaaatgcaaatctgtcattcattgaatgctaaaaaaa--cagaaaaata 578
Query: 487 ttgtacaaaatgaacagaaaaaattaatggttaaacacagcattt-ctagaacacatgtt 545
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 577 ttgtacaaaatgaacagaaaaatttaatggttaaacacagcattttctagaacacatgtt 518
Query: 546 actcattagcaatagattt-atgggcacagaggccatttcctaaga 590
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 517 actcattagcaatagattttatgggcacagaggccatttcctaaga 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 994
Length adjustment: 10
Effective length of query: 580
Effective length of database: 984
Effective search space: 570720
Effective search space used: 570720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
