Query= MSMg01no413_g15.b1 MSMg01no413_g15.b1 CHROMAT_FILE:
MSMg01no413_g15.b1 PHD_FILE: MSMg01no413_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:05 2005
(581 letters)
>mm_chr15_99676345_99677325
Length = 981
Score = 1038 bits (537), Expect = 0.0
Identities = 563/575 (97%), Gaps = 8/575 (1%)
Strand = Plus / Minus
Query: 8 attccagaaaggaattg-tcggtgtagaggatttaccctcttaatttaaatatgtacttt 66
|||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 attccagaaaggaa-tgttaggtgtagaggatttaccctcttaatttaaatatgtacttt 703
Query: 67 acccagacatttaaaaagcttgataattataagagccagtggtagaacattacacttaaa 126
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 702 acccagacatttaaaaagcttg------ataagagccagtggtaaaacattacacttaaa 649
Query: 127 atattctaaatattcacaatactaaagtatgtctaatatttaaaatatattctctcctta 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 atattctaaatattcacaatactaaagtatgtctaatatttaaaatatattctctcctta 589
Query: 187 aatctacagtaaaatcctagaaagacaaatgctgtctttgtttttttcatttgaagatat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 aatctacagtaaaatcctagaaagacaaatgctgtctttgtttttttcatttgaagatat 529
Query: 247 taaaactaaagattatgtaagttggaacattttcacagttgtttggcctggatacaatgt 306
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 528 taaaactaaagattatgtaagttggaacattttcacagttgcatggcctggatacaatgt 469
Query: 307 atcgtgatcatacttacccagtcacccttcctcatcccaactcctactgggcctctgctg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atcgtgatcatacttacccagtcacccttcctcatcccaactcctactgggcctctgctg 409
Query: 367 cttccccatcagttcctctcctgctttgtatcttattgatcaatccatcaatcagctttt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cttccccatcagttcctctcctgctttgtatcttattgatcaatccatcaatcagctttt 349
Query: 427 gattggttgtttggggacaaggcatgtacatccaggacaatgtcaggaggttgtcaccat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gattggttgtttggggacaaggcatgtacatccaggacaatgtcaggaggttgtcaccat 289
Query: 487 gtgtgtcccagggatagcatttcagtggtcaggcttggtggcaaatgtctttacccactt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gtgtgtcccagggatagcatttcagtggtcaggcttggtggcaaatgtctttacccactt 229
Query: 547 aatcatctccccgcctccatgtcctttcttttggt 581
|||||||||||||||||||||||||||||||||||
Sbjct: 228 aatcatctccccgcctccatgtcctttcttttggt 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_g15.g1 MSMg01no413_g15.g1 CHROMAT_FILE:
MSMg01no413_g15.g1 PHD_FILE: MSMg01no413_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:05 2005
(225 letters)
>mm_chr15_99505195_99505819
Length = 625
Score = 406 bits (210), Expect = e-118
Identities = 219/222 (98%)
Strand = Plus / Plus
Query: 1 ccaatctctttaagctctgcctcgcagacccatttttcggcattgtcaatgcttcggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaatctctttaagctctgcctcgcagacccatttttcggcattgtcaatgcttcggcaa 260
Query: 61 aggttacaggaccacgctccttgctgagcctggccatcaccccagtgcacagcaggaaag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttacaggaccatgctccttgctgagcctggccatcaccccagtgcacagcaggaaag 320
Query: 121 tcctggattccccaggccttgagcccagagggctccctggctcacaaactgtttccaaga 180
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tcctggattccccagaccttgagcccagagggctccctggctcacaaactgtttccaaaa 380
Query: 181 ggaaaagaactgtaggtgaagggtgtgtgtgtgtgtgtgtgt 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaaagaactgtaggtgaagggtgtgtgtgtgtgtgtgtgt 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
