Query= MSMg01no414_h07.b1 MSMg01no414_h07.b1 CHROMAT_FILE:
MSMg01no414_h07.b1 PHD_FILE: MSMg01no414_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:30 2005
(401 letters)
>mm_chr15_62061266_62062066
Length = 801
Score = 596 bits (308), Expect = e-174
Identities = 332/340 (97%)
Strand = Plus / Minus
Query: 62 cttggattagaagcaaggcctgaatgagaaggaagaactacagattggatagacgcttca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cttggattagaagcaaggcctgaatgagaaggaagaactacagattggatagacgcttca 741
Query: 122 ccacgcaagttctcattgctgtgatttcccaactttgatggaccgtaacttgtgttctga 181
||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 740 ccatgcaagttctcattgctgtgatttccctactttgatggaccgcaacttgtgttctga 681
Query: 182 aataaatgttctctctagtaaattagttttgtcagagcattttttttaaaccaaagcaat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aataaatgttctctctagtaaattagttttgtcagagcattttttttaaaccaaagcaat 621
Query: 242 aagaaaagaagctaagacagaaggcaagtagggagattgagaatgatggctaagaattta 301
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagagaagaagctaagacagaaggcaagtagggagattgagaatgatggctaagaattta 561
Query: 302 cttctgctaatgagtagagctaaatctgcacgacactaaatgttattgagtctgtgcatt 361
||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 560 cttctgctaatgagtagagttaaatctgcatgacactaaatgttattgagtctgcgcatt 501
Query: 362 gagtcggtgcattgctctgggtggtaaagattctcagaag 401
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 500 gagtcggtgcattgctctgggtggcaaagattctcagaag 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_h07.g1 MSMg01no414_h07.g1 CHROMAT_FILE:
MSMg01no414_h07.g1 PHD_FILE: MSMg01no414_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:30 2005
(472 letters)
>mm_chr15_61878455_61879323
Length = 869
Score = 853 bits (441), Expect = 0.0
Identities = 461/469 (98%), Gaps = 3/469 (0%)
Strand = Plus / Plus
Query: 1 tgggacagaggtatgactagggaaatgaaaagtctcgtcctcaatgaaggatgagcttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggacagaggtatgactagggaaatgaaaagtctcgtcctcaatgaaggatgagcttat 260
Query: 61 tcgtcagaatgggaaggaggactgggggacagacagatcagtgttagaatgctctcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgtcagaatgggaaggaggactgggggacagacagatcagtgttagaatgctctcccag 320
Query: 121 cattctcaagaccctgagttcaagcctctgtaaacaccacccccatcagggaggggaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattctcaagaccctgagttcaagcctctgtaaacaccacccccatcagggaggggaagg 380
Query: 181 agggagaaaggaaaagctgacgtgggagagggaatggtttctggagttagggacttggca 240
|||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||
Sbjct: 381 agggagaaaggaaaagctgatgtgggagggggaatggtttctgaagttagggacttggca 440
Query: 241 gtatgtgtatgtcttgcataaggccctgtatggatttgatggccagcacttccctccagt 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatgtgtatgtcgtgcataaggccctgtatggatttgatggccagcacttccctccagt 500
Query: 301 aatctactcccaccaaaaacagttgtaaaattgaaaaaatttcttcagtcaagtatgatt 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 aatctactcccaccaaaaacagttataaaattgaaaaaatttcttcagtcaagtatgatt 560
Query: 361 aatattatcttgggttttgtctttctgtcgttgctttttttcttagatagttataataat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatattatcttgggttttgtctttctgtcgttgctttttttcttagatagttataataat 620
Query: 421 taccaccgtgtatatgctgagctgctggcttcttgctttgttgctgccc 469
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacc---gtgtatatgctgagctgctggcttcttgctttgttgctgccc 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 869
Length adjustment: 10
Effective length of query: 462
Effective length of database: 859
Effective search space: 396858
Effective search space used: 396858
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
