Query= MSMg01no415_a08.b1 MSMg01no415_a08.b1 CHROMAT_FILE:
MSMg01no415_a08.b1 PHD_FILE: MSMg01no415_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:16 2005
(531 letters)
>mm_chr15_71586994_71587924
Length = 931
Score = 1006 bits (520), Expect = 0.0
Identities = 526/528 (99%)
Strand = Plus / Minus
Query: 4 ggaattctctctttcgcttatctctgcccattcttggtggatagtgtttctttattatct 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ggaattctctctttggcttatctctgcccattcttggtggatagtgtttctttattatct 672
Query: 64 cccttggaagatcatgcggcagctggtaaacaatgtggtcaagatttgactggtgcccat 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cccttggaagatcatgcagcagctggtaaacaatgtggtcaagatttgactggtgcccat 612
Query: 124 ttagggagtagaccttaaagtggcctcacagcaaaatctctggacatagaatctatgaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttagggagtagaccttaaagtggcctcacagcaaaatctctggacatagaatctatgaac 552
Query: 184 taagacaaagtaaagatgtgtttgatggacaataatgtcccatttgcacagtatctgctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 taagacaaagtaaagatgtgtttgatggacaataatgtcccatttgcacagtatctgctg 492
Query: 244 aaacatcaattatatcccatttgattattgttttccttttatccccaaatttctggataa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaacatcaattatatcccatttgattattgttttccttttatccccaaatttctggataa 432
Query: 304 ttgtgtcaattttccaattttctcattgtgtttaaacattgttatggctttctctttttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttgtgtcaattttccaattttctcattgtgtttaaacattgttatggctttctctttttc 372
Query: 364 tcaaaggaaaattggacaacaaacagtgaagcagacattggaccagccattatttaaaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcaaaggaaaattggacaacaaacagtgaagcagacattggaccagccattatttaaaga 312
Query: 424 aatagagggactgctggtaatttgtgtcatttaagctgaacctgagacctcaattcccac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aatagagggactgctggtaatttgtgtcatttaagctgaacctgagacctcaattcccac 252
Query: 484 tctccgagtgaagcagcttaattgaggagcattctttgcaaatagaca 531
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tctccgagtgaagcagcttaattgaggagcattctttgcaaatagaca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_a08.g1 MSMg01no415_a08.g1 CHROMAT_FILE:
MSMg01no415_a08.g1 PHD_FILE: MSMg01no415_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:16 2005
(242 letters)
>mm_chr15_71402287_71402925
Length = 639
Score = 445 bits (230), Expect = e-129
Identities = 238/242 (98%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 1 tcatcattaccagttgctgaagaagacaaatcatgttctacccttctccaaatacccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tcatcattaccagttgctgaagaagacaaatcatgttctacccttctccaaat---cccc 257
Query: 61 cccaaactaacatggttaaatatcaataaatgtcatagtaattaatagacatggatggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cccaaactaacatggttaaatatcaataaatgtcatagtaattaatagacatggatggat 317
Query: 121 ggaggaataggtgactggatggaaagatggatgattagatgaaaggagaaatggatgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggaggaataggtgactggatggaaagatggatgattagatgaaaggagaaatggatgtat 377
Query: 181 agaagaaaatcccagtgatacagagtcctctggtaaacaacagagctatacaatccaaaa 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agaagaaaatccaagtgatacagagtcctctggtaaacaacagagctatacaatccaaaa 437
Query: 241 tc 242
||
Sbjct: 438 tc 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 639
Length adjustment: 9
Effective length of query: 233
Effective length of database: 630
Effective search space: 146790
Effective search space used: 146790
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|