Query= MSMg01no416_m03.b1 MSMg01no416_m03.b1 CHROMAT_FILE:
MSMg01no416_m03.b1 PHD_FILE: MSMg01no416_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:27 2005
(539 letters)
>mm_chr15_16891454_16892391
Length = 938
Score = 996 bits (515), Expect = 0.0
Identities = 533/539 (98%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 1 attgtgcctaaatattattggaacaggccttagtcagggaatccaagtcctcagaacaga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 attgtgcctaaatattattggaacaggccttagtcagggaacccaagtcctcagaacaga 260
Query: 61 aataataactcaaattctgagaattattttgcaacctagaactactttgaaagatataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 aataataactcaaattctgagaattattttgcaacctagaactactttgaaagatttaga 320
Query: 121 tggcagaaactgtatgttttacatacacattaggataagaatgagaacatggatccagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcagaaactgtatgttttacatacacattaggataagaatgagaacatggatccagga 380
Query: 181 acactttccaaaaatgcagtgttaactttcagtaataaaaagctcgccgcttagctaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactttccaaaaatgcagtgttaactttcagtaataaaaagctcgccgcttagctaatt 440
Query: 241 gttcaggagtgtttatctgtcagtaatactctctgtttaataactggctagttctgagaa 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttcaggagtgtttaactgtcagtaatactctctgtttaataactggctagttctgagaa 500
Query: 301 acaaagtgacctttgaaaatgccaaccaccgaacatgacttgatgtgaagtcttcaagag 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 acaaagtgacctttgaaaatgccaaccaccaaacatgacttgatgtgaagtcttcaagag 560
Query: 361 agttctgttccttacatcacgtagctgctccggaagctgtcactcttttcctttctgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttctgttccttacatcacgtagctgctccggaagctgtcactcttttcctttctgtgc 620
Query: 421 caaagtagtatcaactctcagatgacatataagcacggtgacagttgtttctcattaaaa 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 caaagtagtatcaactctcagatgacatatgagcacggtgacagttgtttctcattaaaa 680
Query: 481 ccattggagtaaaaaacctaaagaactttcaggaaaaaaaaattacgtgtgaatcatgt 539
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 ccattggagtaaaaaacctaaagaactttcaggaaaaaaaa-ttacgtgtgaatcatgt 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 938
Length adjustment: 10
Effective length of query: 529
Effective length of database: 928
Effective search space: 490912
Effective search space used: 490912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_m03.g1 MSMg01no416_m03.g1 CHROMAT_FILE:
MSMg01no416_m03.g1 PHD_FILE: MSMg01no416_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:27 2005
(668 letters)
>mm_chr15_17038131_17039198
Length = 1068
Score = 1268 bits (656), Expect = 0.0
Identities = 662/664 (99%)
Strand = Plus / Minus
Query: 1 tgtatctgtctgctagatttcttttctgtttatttttatttagcaacattttaactcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tgtatctgtctgctagatttcttttctgtttatttttatttagcaacattttaactcatt 805
Query: 61 ctagtttatgactatctaaaataaattagttatggattgaaaattttgctattcttttaa 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 804 ctagtttatgactatctaaaataaattagttatggattgcaaattttgctattcttttaa 745
Query: 121 aaattgataagcatagtaaagtaataaaccagggtggtttttttacatgtcagttacaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaattgataagcatagtaaagtaataaaccagggtggtttttttacatgtcagttacaat 685
Query: 181 tatcatgagtttaaaatatctattgtaattacacagacttactaataatttctcattatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tatcatgagtttaaaatatctattgtaattacacagacttactaataatttctcattatg 625
Query: 241 tcattttctaacaaaatgtagtataaaaattccacgggattggaagtttttgatttcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcattttctaacaaaatgtagtataaaaattccacgggattggaagtttttgatttcact 565
Query: 301 ctaagttccataatatcttctttctaatttttaatttattctttatccttctctaatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctaagttccataatatcttctttctaatttttaatttattctttatccttctctaatatt 505
Query: 361 cattctaatatccataagccagactaatccagtatttatttttatgctggttatgaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cattctaatatccataagccagactaatccagtatttatttttatgctggttatgaaaat 445
Query: 421 gatgaaaataatagattgctggaaacagtgtaacttgtaagtccaccaaataagttgtat 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 gatgaaaataatagattgctggaaacagtgtaacttgtaagtctaccaaataagttgtat 385
Query: 481 taacctataaacttgaatggttttcttattctttactaattggagcctttctctctttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taacctataaacttgaatggttttcttattctttactaattggagcctttctctctttga 325
Query: 541 gcacgtgatacgattctttccaatgccaataatctgtatcctctgcacagacacgaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcacgtgatacgattctttccaatgccaataatctgtatcctctgcacagacacgaaatg 265
Query: 601 gagaaacatccaacaactcggacatttccttcccacacttagaagcatgatatcatcaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagaaacatccaacaactcggacatttccttcccacacttagaagcatgatatcatcaat 205
Query: 661 caaa 664
||||
Sbjct: 204 caaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
