Query= MSMg01no418_b21.b1 MSMg01no418_b21.b1 CHROMAT_FILE:
MSMg01no418_b21.b1 PHD_FILE: MSMg01no418_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:14 2005
(540 letters)
>mm_chr15_58278488_58279427
Length = 940
Score = 1036 bits (536), Expect = 0.0
Identities = 536/536 (100%)
Strand = Plus / Minus
Query: 5 gaattcaaatgtacctccttgcagctctgcttcatcaaatggaaagggtatatggacagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaattcaaatgtacctccttgcagctctgcttcatcaaatggaaagggtatatggacagt 681
Query: 65 ctctcctaccccatgcaaaccatgtccctacaaacagaagaaatgcaagtggaacgatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctctcctaccccatgcaaaccatgtccctacaaacagaagaaatgcaagtggaacgatga 621
Query: 125 gtgagaaccaacggtaactgaaaacaccacgtaagcatgggccacgtcatagcacactct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtgagaaccaacggtaactgaaaacaccacgtaagcatgggccacgtcatagcacactct 561
Query: 185 accatacaccatcaaatgccctgggcaattttgcttttctttttcatcaaggaatgacaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accatacaccatcaaatgccctgggcaattttgcttttctttttcatcaaggaatgacaa 501
Query: 245 atgtttattaaattcttagacaatatttttcaagtagaatatatgaaaagaaaaaaaata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgtttattaaattcttagacaatatttttcaagtagaatatatgaaaagaaaaaaaata 441
Query: 305 agaaggctaattaacaggcaaaccagccaggcttgagccaagtgaggacttaagtacata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaaggctaattaacaggcaaaccagccaggcttgagccaagtgaggacttaagtacata 381
Query: 365 tactattagttcaggcacagttctgagaaaaaaggagggcaaaaaacctgactgggatgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tactattagttcaggcacagttctgagaaaaaaggagggcaaaaaacctgactgggatgc 321
Query: 425 aaaactcaaactcctgcaacaaaagggtacgctttcaaagttacttgctgataattacat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaactcaaactcctgcaacaaaagggtacgctttcaaagttacttgctgataattacat 261
Query: 485 ataccagaaacaatcaaaatccctcacaacacaggaatggttaataaatgacggta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ataccagaaacaatcaaaatccctcacaacacaggaatggttaataaatgacggta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_b21.g1 MSMg01no418_b21.g1 CHROMAT_FILE:
MSMg01no418_b21.g1 PHD_FILE: MSMg01no418_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:14 2005
(378 letters)
>mm_chr15_58100501_58101282
Length = 782
Score = 654 bits (338), Expect = 0.0
Identities = 370/382 (96%), Gaps = 4/382 (1%)
Strand = Plus / Plus
Query: 1 agtgcaggatacacattactgcttctcccatagctccacctgctacaaggctggatctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgcaggatacacattactgcttctcccatagctccacctgctacaaggctggatctgc 260
Query: 61 taacagttacacctgtgccatgtattcagcatc--g--agactccagacgcacagagtgg 116
||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 261 taacagttacacctgtgccatgtattcagcatccagacagactccagatgcacagagtgg 320
Query: 117 gtcttagtagatggagcctgctgtctccaactcttcaggtggtggatgggccaaacacat 176
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcttagtagatggagcccactgtctccaactcttcaggtggtggatgggccaaacacat 380
Query: 177 ccaagatatcctatttacaaatactgtgagtgaaggactggagaaatggctcagcaggta 236
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 381 ccaagatatcctatttacaaatactgtgagtgaagggctggagagatggctcagcaggta 440
Query: 237 caagtgcttcctgcgctctcaaagaaccggagttcaattccatcatgcatgtataggttg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtgcttcctgcgctctcaaagaaccggagttcaattccatcatgcatgtataggttg 500
Query: 297 cttacaactgcctgtaattctaagtcttggggatttggtgcctccactttctggcctcct 356
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttacaactgcctataattctaagtcttggggatttggtgcctccactttctggcctcct 560
Query: 357 gtggacaccaacacacacacac 378
||||||||||||||||||||||
Sbjct: 561 gtggacaccaacacacacacac 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 782
Length adjustment: 9
Effective length of query: 369
Effective length of database: 773
Effective search space: 285237
Effective search space used: 285237
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
