NNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTCTGCTCTGAGCCCCATTTTTTAATGGGGTTATT
TGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTA
GTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGT
GGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAG
TTTCATTAGGTACCAGTTGTCAATTCTCGATCTTACAGCACAAGCCATTG
CTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTC
CCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTC
CTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGA
TTCGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTG
AAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGAT
CAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCC
ATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACA
ATTGCTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCTGGCAGAAGT
TCTTTTATCCTTGAAAAGACTTTTTGCTATCCTAGGTTTT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTTGATCCAGTGTATATTTCTAT
ACACGTTAGAGAAAATTTTAATGGTAGTAACTTAGTGTTTAATTTGTCAT
TCTTCCAACATTGGAAATACAGGCAGCCATATGGCTTCTCTCACCACTGA
ATCTGATTGACATCTCAGTTTTAGATATGGCCTCACAGTTCTCCCACAAA
CAGATTTCCCAGAAATCTAAAAAAGTAGGAATCCAGGGAAAGTCAAACAT
TACAACATTATATCTGTTCTCATTTTTGTTTGATCAAATTTATCTGCTTT
AGTAAGCTACTGATATTTTATTTTTCTAATAGCACACAGCTTTATTACCG
CTTACAAAAAATCATGGAAATGAAGGCAACAAACCTCCTCTCCTTAAATC
CATCAGTGGTAAATAGCTCAGTACTGAGACATGAGGCCTCCTGAATCTTT
CTCTGTGTCTTCCTGTCTACTGAGTGCCCATCTTGTGCAGACCTGGTGCC
TGTCTGAAGCTGTGACTTAATAATTTAACTTTTGTACATGTTATCTATCT
AGAAAATTACCCATTTCATTTATCTCTTTTGCCCAGTGTAAACTTTTGTA
GTAAGATCTGATGAATTTTTTGAATCTCCTCAGNTTCTGTTGTTTTGCCT
CCCTTTTCCTTTTTGATTTGGAAATTTAGAG

Query= MSMg01no418_j02.g1 MSMg01no418_j02.g1 CHROMAT_FILE:
MSMg01no418_j02.g1 PHD_FILE: MSMg01no418_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:48 2005
         (574 letters)



>mm_chr15_44952797_44953771
          Length = 975

 Score = 1065 bits (551), Expect = 0.0
 Identities = 569/575 (98%), Gaps = 1/575 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttgatccagtgtatattt-ctatacacgttagagaaaattttaatggtagtaacttag 59
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgatccagtgtatattttctatacacgttagagaaaattttaatggtagtaacttag 260

                                                                       
Query: 60  tgtttaatttgtcattcttccaacattggaaatacaggcagccatatggcttctctcacc 119
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttaatttgtcattctttcaacattggaaatacaggcagccatatggcttctctcacc 320

                                                                       
Query: 120 actgaatctgattgacatctcagttttagatatggcctcacagttctcccacaaacagat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgaatctgattgacatctcagttttagatatggcctcacagttctcccacaaacagat 380

                                                                       
Query: 180 ttcccagaaatctaaaaaagtaggaatccagggaaagtcaaacattacaacattatatct 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcccagaaatctaaaaaagtaggaatccagggaaagtcaaacattacaacattatatct 440

                                                                       
Query: 240 gttctcatttttgtttgatcaaatttatctgctttagtaagctactgatattttattttt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttctcatttttgtttgatcaaatttatctgctttagtaagctactgatattttattttt 500

                                                                       
Query: 300 ctaatagcacacagctttattaccgcttacaaaaaatcatggaaatgaaggcaacaaacc 359
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaatagcacacagctttattactgcttacaaaaaatcatggaaatgaaggcaacaaacc 560

                                                                       
Query: 360 tcctctccttaaatccatcagtggtaaatagctcagtactgagacatgaggcctcctgaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctctccttaaatccatcagtggtaaatagctcagtactgagacatgaggcctcctgaa 620

                                                                       
Query: 420 tctttctctgtgtcttcctgtctactgagtgcccatcttgtgcagacctggtgcctgtct 479
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 tctttctctgtgtcttcctgtctactgagtgcccatcttgtgcggacctggtgcctgtct 680

                                                                       
Query: 480 gaagctgtgacttaataatttaacttttgtacatgttatctatctagaaaattacccatt 539
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 gaagctgtgacttaataatttaactttcgtacatgttatctatctagaaaattacccatt 740

                                              
Query: 540 tcatttatctcttttgcccagtgtaaacttttgta 574
           ||||||||||||||||||||||||| |||||||||
Sbjct: 741 tcatttatctcttttgcccagtgtagacttttgta 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 975
Length adjustment: 10
Effective length of query: 564
Effective length of database: 965
Effective search space:   544260
Effective search space used:   544260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)