Query= MSMg01no422_k12.b1 MSMg01no422_k12.b1 CHROMAT_FILE:
MSMg01no422_k12.b1 PHD_FILE: MSMg01no422_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:09 2005
(465 letters)
>mm_chr15_83287709_83288573
Length = 865
Score = 841 bits (435), Expect = 0.0
Identities = 459/467 (98%), Gaps = 3/467 (0%)
Strand = Plus / Plus
Query: 1 tctagaccccaaccttgaagctcatcatattctgaaggtgcccaccaatctccccttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctagaccccaaccttgaagctcatcatattctgaaggtgcccaccaatctccccttccc 260
Query: 61 tctcctccatagcccccacttgctacacacaccacctgcaccctcctttttttttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcctccatagcccccacttgctacacacaccacctgcaccctcctttttttttttttt 320
Query: 121 tcgagacagggtttctctgtgtagccctagctgtcctggaactcactctgtagaccttga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 -cgagacagggtttctctgtgtagccctagctgtcctggaactcactctgtagaccttga 379
Query: 181 acttaaaaaactcctctggcttctatctcccaagtgctaggattaaatgtgtatgccaac 240
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acttagaaaactcctttggcttctatctcccaagtgctaggattaaatgtgtatgccaac 439
Query: 241 accacccagttatcaccacattcttgatgactccaaagctcacatgtggcaaaggccacc 300
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 accacccagctatcaccacattcttgatgactccaaagctcacatgtagcaaaggccacc 499
Query: 301 tccctggagttaagttctgcagcatgctaaaagcagccaaaccagcc-tcctctgtgtct 359
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 500 tccctggagttaagttctgcagcatgctaagagcagccaaaccagccctcctctgtgtct 559
Query: 360 ctgcacctggacccagatctacctagtactgccactgtgagacagtagcttctagatcca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgcacctggacccagatctacctagtactgccactgtgagacagtagcttctagatcca 619
Query: 420 ttctgccc-agctgcttctatagaacacaagactttaaccttgtaat 465
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttctgccccagctgcttctatagaacacaagactttaaccttgtaat 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_k12.g1 MSMg01no422_k12.g1 CHROMAT_FILE:
MSMg01no422_k12.g1 PHD_FILE: MSMg01no422_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:09 2005
(246 letters)
>mm_chr15_83453934_83454579
Length = 646
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Minus
Query: 1 accatgcagttcacacatggtacagtggggttttagtacgatggatgagtgacatgaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 accatgcagttcacacatggtacagtggggttttagtacgatggatgagtgacatgaacc 286
Query: 61 accacgtgactatgtagaagctcacccatgtggaaggccaatcagggcatcagatgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 accacgtgactatgtagaagctcacccatgtggaaggccaatcagggcatcagatgcctt 226
Query: 121 cctctaccactcaggcaagcttgctgattggtctgtctgcttccgcagcaacaggattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 cctctaccactcaggcaagcttgctgattggtctgtctgcttccgcagcaacaggattac 166
Query: 181 tatcctgtgctgtcacatccagcttcttttaaatgcattctaggaatccaactcaggttg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aatcctgtgctgtcacatccagcttcttttaaatgcattctaggaatccaactcaggttg 106
Query: 241 tggtgg 246
||||||
Sbjct: 105 tggtgg 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
