Query= MSMg01no424_n21.b1 MSMg01no424_n21.b1 CHROMAT_FILE:
MSMg01no424_n21.b1 PHD_FILE: MSMg01no424_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:55 2005
(535 letters)
>mm_chr15_68288490_68289425
Length = 936
Score = 1015 bits (525), Expect = 0.0
Identities = 531/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcccattc-caacagcatatgtcaaacgtgggttgtttatattgttattgggt 62
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ggaattctcccattcacaacagcatatgtcaaacgtgggttgtttatattgttattgggt 677
Query: 63 aaataatccaaatgtgtctctgatgtagtgaaaagagaaagatgactgaatgtaaacaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaataatccaaatgtgtctctgatgtagtgaaaagagaaagatgactgaatgtaaacaaa 617
Query: 123 gtaggcaacgtgagttctcttactcctccactgcactctgtccccagagctccagttaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtaggcaacgtgagttctcttactcctccactgcactctgtccccagagctccagttaca 557
Query: 183 taattgctctacttgaaactgactcttgaggtgtcagaagcctgggcagctttcaaagtt 242
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 556 taattgctctacttgaaactgactcttgtggtgtcagaagcctgggcagctttcaaagtt 497
Query: 243 gtggctgcttcctgcctctactgtgtcttctctggcttctcctggctccactaatgtctt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtggctgcttcctgcctctactgtgtcttctctggcttctcctggctccactaatgtctt 437
Query: 303 actatatactttcagtgccaaattggctaaaattggttacaaatgcaaatagttacaaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 actatatactttcagtgccaaattggctaaaattggttacaaatgcaaatagttacaaaa 377
Query: 363 tcattcacactctgtgccaagacaagccatccctgtttcccaaatagcatatcctctttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcattcacactctgtgccaagacaagccatccctgtttcccaaatagcatatcctctttg 317
Query: 423 atctgatcctgcttccgtggacagagtcagccactcttctgtctcttagaagaccttgtg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atctgatcctgcttccgtggacagagtcagccactcttctgtctcttagaagaccttgtg 257
Query: 483 cacaatcttgtgagcatgttctgcagtcattggatgctttaagaatcgctcag 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cacaatcttgtgagcatgttctgcagtcattggatgctttaagaatcgctcag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 936
Length adjustment: 10
Effective length of query: 525
Effective length of database: 926
Effective search space: 486150
Effective search space used: 486150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_n21.g1 MSMg01no424_n21.g1 CHROMAT_FILE:
MSMg01no424_n21.g1 PHD_FILE: MSMg01no424_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:55 2005
(368 letters)
>mm_chr15_68223766_68224531
Length = 766
Score = 625 bits (323), Expect = 0.0
Identities = 355/369 (96%), Gaps = 8/369 (2%)
Strand = Plus / Plus
Query: 1 agtaggaagggataacaaaaa-tctttattcatacatattattattttcatgtagggcat 59
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 201 agtaggaagggataacaaaaaatctttattcatacatattatt---ttcatgtagggcat 257
Query: 60 ttgtgtctagcatagtgctagtaacaatttttagagctactatcttaattttttacttgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttgtgtctagcatagtgctagtaacaatttttagagctactatcttaattttttacttgt 317
Query: 120 gtgagtgcttttcttgcatgtatgtatgtatgtatgtatgtatgtatgtatgtttgtatg 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 318 gggagtgcttttcttgcatgtatgtatgtatgtatgtatgtatgtatgtatgt----atg 373
Query: 180 tataccattgtgtgcctactgcacataaagattagaaaagagcattggacctcttagaac 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 374 tataccattgtgtgcctactgcacataaagattagaaacgagcattggacctcttagaac 433
Query: 240 tagagtttcttttgtttgtgagctgccaggtggtaactggaaactgaacctaggttcttt 299
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tagagtttcaggtggttgtgagctgccaggtggtaactggaaactgaacctaggttcttt 493
Query: 300 ccaagagcaggaaatgctcttaaatatggagttccagcacccaaccccataatcttattt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccaagagcaggaaatgctcttaaatatggagttccagcacccaaccccataatcttattt 553
Query: 360 ctgaaacaa 368
|||||||||
Sbjct: 554 ctgaaacaa 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 766
Length adjustment: 9
Effective length of query: 359
Effective length of database: 757
Effective search space: 271763
Effective search space used: 271763
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
