XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGTCTGGG
TTGCTTACTACAGAAAATTCCTGTTTCCTGGGATGAAAGAGAAGACTGTG
GCAGGCGCTCCCATGAAGCCTTGCCTGCGAGTGGGGCATGCTGGGTAAGC
TGTTTGCTCTGTGATTGGCTGGGAGGGTCAATCGCTCCACAGTCAATGAG
ACCACATTCGTCTAAACATCAAGATCATAGAAGAGAAAGTGACAACAGAA
CATTGAGGATGGTGACTGTTTCCGACAATGGATGTGGGATTTCTTCATTT
ACTAAGGCGCTTCCAGGTTTCGCTCTTGGGGGTAGCTCATGGCACACACA
CTTTACACATATCTTGTTATATTTGCCCTTAAATGATCATTCTGTTTGAT
ATATTTAGTTACTTGTCTCGTTGCTGTGGGGGGAAAAAGGGGGGTGGGGG
GGGGANCTGATAAGNCATTTANNAGAGGAAGGGGNTTTTTGGTTGGTTTT
GTNNTTTAGGTTAANATTTAGGGAGATANAGAATTANGGTGGGAAAGAAA
GNGTTGGTGTTNANATTGGTTGTGAANTNAGGAATGGAGGAAAATAGAAG
NGGGGGNTAAGTTAGGAAATGTAAGGGNNAAGGNAGGGAANNGNTTNTTT
TAGTATGGGTGTTTATTTTAAAAGTTTNAAAAANTTTTTAAATTGTNGTT
TATGTTATGTANNAATTTTAAANTAGTAATNTATTTGGTAAATTTTTTAT
TTNAAAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCTCAGCCATAAGCTGGAAAGACGGCACAGTGCTTAACACC
ACTGACTGCCCTCACAGACTAGAATTTGATTCCCAGCACCCACATCAAGT
GGCTCAGAACTGCCTGTTACTCTAGGGCATCCAATGCTCTCCTCTGGTCT
CTAAAGGCATCTGTACTCAGTTGTACTTACACACACACACACAGACACAC
ACACACACACACAAATCACATCAAAGGAACATAAGAGTGTAACTTTAACT
TTTTCAAATCTTAATTTTAATGATGGTTCTTCAATGCTTTAACCTCCCTT
GTAGCCCACCACCCAGCAGAGGTAGTGGGAAAGAAAGGATACAAGGGATG
TGGACTTGTTTAGAAAGTTGTTTTTTTTTTTTGGAGCAACTCTCATCTGT
GTTGTATGGAAATCAGCAGTTCAGTTCACAGATCAGCAGTGGCAGCTCCA
TTCGCTCACAAACACTTCATGGATACAGCAGCAGTCCAGTTCAGTAGAGT
CCCTCAGTCCCTCAGCAACAGCAGTGACATGACCTAAAAGAAGGCAGCCA
GCTTCAGCCAGGGCTCAAGTCCGCAGGAGGAAACCTCCGGAATACCAGGA
GAAAGTCCCCCCTCTGCCTCCTCTCAGGAAAGTGAAAACAATTAAAGAAT
GGGAACCCCCAGCCTTAACCCGGTTGTTGTACCCCAAAGCTAAATCCTTT
GGGGGCCTATTAAACCCCCCA

Query= MSMg01no425_h17.b1 MSMg01no425_h17.b1 CHROMAT_FILE:
MSMg01no425_h17.b1 PHD_FILE: MSMg01no425_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:42 2005
         (434 letters)



>mm_chr15_86908172_86909003
          Length = 832

 Score =  721 bits (373), Expect = 0.0
 Identities = 406/417 (97%), Gaps = 2/417 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   attccagtctgggttgcttactacagaaaattcctgtttcctgggatgaaagagaagact 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attccagtctgggttgcttactacagaaaattcctgtttcctgggatgaaagagaagact 266

                                                                       
Query: 67  gtggcaggcgctcccatgaagccttgcctgcgagtggggcatgctgggtaagctgtttgc 126
           |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 267 gtggcaggcgctcccatgaagccttgtct-cgagttgggcatgctgggtaagctgtttgc 325

                                                                       
Query: 127 tctgtgattggctgggagggtcaatcgctccacagtcaatgagaccacattcgtctaaac 186
           |||||||||||||||||||||||| | ||||||||||||||| |||||||| ||||||||
Sbjct: 326 tctgtgattggctgggagggtcaaccactccacagtcaatgaaaccacattagtctaaac 385

                                                                       
Query: 187 atcaagatcatagaagagaaagtgacaacagaacattgaggatggtgactgtttccgaca 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 386 atcaagatcatagaagagaaagtgacaacagaacattgaggatggtgactgtttctgaca 445

                                                                       
Query: 247 atggatgtgggatttcttcatttactaaggcgcttccaggtttcgctcttgggggtagct 306
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 446 atggatgtgggatttcttcatttactaaggcgcttccagatttcgctcttgggggtagct 505

                                                                       
Query: 307 catggcacacacactttacacatatcttgttatatttgcccttaaatgatcattctgttt 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 catggcacacacactttacacatatcttgttatatttgcccttaaatgatcattctgttt 565

                                                                    
Query: 367 gatatatttagttacttgtctcgttgctgtggggggaaaaaggggggtggggggggg 423
           |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 566 gatatatttagttacttgtctcgttgctgtgggggggaaaaggggg-tggggggggg 621


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 832
Length adjustment: 9
Effective length of query: 425
Effective length of database: 823
Effective search space:   349775
Effective search space used:   349775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)