Query= MSMg01no427_h17.b1 MSMg01no427_h17.b1 CHROMAT_FILE:
MSMg01no427_h17.b1 PHD_FILE: MSMg01no427_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:22 2005
(526 letters)
>mm_chr15_85083640_85084565
Length = 926
Score = 953 bits (493), Expect = 0.0
Identities = 516/525 (98%), Gaps = 3/525 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttgtgtcgctctgccatagtaagcatctcatcccagccttccttacatcccg 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagttgtggggctctgccatagtaagcatctcatcccagccttccttacatcccg 264
Query: 65 tctctagatatcatagttgcagtgagtgcccacgctcctaatacctcaataagaattaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctctagatatcatagttgcagtgagtgcccacgctcctaatacctcaataagaattaaa 324
Query: 125 tgtcaatacattgaagccttgggggatgctcaccgtatcctttctgttacagaagctttg 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 tgtcaatacattgaagccttgggggatgctcaccatatcctttctgttacagaagctttg 384
Query: 185 cccaacactccaggctatgttctgtctctcttgctttttttttt---aatttttaatttt 241
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 385 cccaacactccaggctgtgttctgtctctcttgctttttttttttttaatttttaatttt 444
Query: 242 ttctggcccagctccagccatatttatttcatataaatgtgtgtacactgtagctgtctt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttctggcccagctccagccatatttatttcatataaatgtgtgtacactgtagctgtctt 504
Query: 302 cagacacactagaagatggcattggatatccattacagatggttgtgagccaccatgtga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagacacactagaagatggcattggatatccattacagatggttgtgagccaccatgtga 564
Query: 362 ttcctgggaattgaactcaggacctctggaagagcagtcagtgctcttaaccgctgagcc 421
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 565 ttcctgggaattgaactcaggacctctggaagagcagtcagtgctcttaaccactgagcc 624
Query: 422 atctctccagaccatctcttttgcttataacactatctttatggtgcttggaacagccca 481
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atctctccagaccgtctcttttgcttataacactatctttatggtgcttggaacagccca 684
Query: 482 agattcccatttgcttcagttttctgaatgtgtctttctcatcat 526
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agattcccatttgcttcagttttctgaatgtgtctttctcatcat 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_h17.g1 MSMg01no427_h17.g1 CHROMAT_FILE:
MSMg01no427_h17.g1 PHD_FILE: MSMg01no427_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:22 2005
(321 letters)
>mm_chr15_85231619_85232337
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 314/319 (98%), Gaps = 3/319 (0%)
Strand = Plus / Minus
Query: 1 taagcgagccagatcttgtctatacactcaatcatcaaatcaatacgctgtaactctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taagcgagccagatcttgtctatacactcaatcatcaaatcaatacgctgtaactctgag 455
Query: 61 agcatacaacgcaggcaggaggacacagacctgagactgaaaagttcctccagggctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agcatacaacgcaggcaggaggacacagacctgagactgaaaagttcctccagggctggt 395
Query: 121 ggctcaagaaataagggcgcctgcttgtacatgacggacgaactccatttgtagaatcca 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggctcaagaagtaagggcgcctgcttgtacatgacggacgaactccatttgtagaatcca 335
Query: 181 cacgggtaaaggacagacctgactgacaaaagctgtcctcttttgtcagtttgcccacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 334 cacgggtaaaggacagacctgactgacaaaagctgtcctcttttgtcagtttgtccacag 275
Query: 241 tttaaatgtccacttaatgtgtatgtgggcacacattaaataaatgagtaagtgtgtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tttaaatgtccacttaatgtgtatgtgggcacacattaaataaatgagtaagtgtgtgtg 215
Query: 301 tgtgtngtgggggggggtg 319
||||| |||||||||||
Sbjct: 214 tgtgt---gggggggggtg 199
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 719
Length adjustment: 9
Effective length of query: 312
Effective length of database: 710
Effective search space: 221520
Effective search space used: 221520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
