Query= MSMg01no429_b18.b1 MSMg01no429_b18.b1 CHROMAT_FILE:
MSMg01no429_b18.b1 PHD_FILE: MSMg01no429_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:29 2005
(241 letters)
>mm_chr15_11148404_11149044
Length = 641
Score = 397 bits (205), Expect = e-115
Identities = 218/223 (97%), Gaps = 3/223 (1%)
Strand = Plus / Minus
Query: 9 tcactcttgtagttcaggcataatatagtaagacttgattcaatgtaatgattacagaaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcactcttgtagttcaggcataatatagtaagacttgattcaatgtaatgattacagaaa 300
Query: 69 tgatgagccctgggtatgtttgaactgccctttggaggtgggaccactatggactttgtt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgatgagccctgggtatgtttgaactgccctttggaggtgggaccactatggactttgtt 240
Query: 129 gttagatttggatgatacagtaaagaaatgctagatggataggtagatagatagatagat 188
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 239 gttagatttggatgatacagtaaataaatgctagatggataggtagatagatagatagat 180
Query: 189 agatagatagatagatagatagatagatagat--a-gatagat 228
|||||||||||||||||||||||||||| ||| | |||||||
Sbjct: 179 agatagatagatagatagatagatagatggatggatgatagat 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no429_b18.g1 MSMg01no429_b18.g1 CHROMAT_FILE:
MSMg01no429_b18.g1 PHD_FILE: MSMg01no429_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:29 2005
(373 letters)
>mm_chr15_10992519_10993291
Length = 773
Score = 690 bits (357), Expect = 0.0
Identities = 369/373 (98%)
Strand = Plus / Plus
Query: 1 caggaggttgaagctgaaagaggccagagaatagattttaagacagccagaaaggaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggaggttgaagctgaaagaggccagagaatagattttaagacagccagaaaggaatgc 260
Query: 61 agcttctagatttcagcccagtgaattctgttgcagatcttcagaacttaatacaataaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 agcttcttgatttcagcccagtgaattctgttgcagatcttcagaacttaagacaataaa 320
Query: 121 tccgtgttgttttaagacagtaagtttgtaaatttccactagcaaaacacaggagccagt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtgttgttttaagacagtaagtttgtaaatttccactagcaaaacacaggagccagt 380
Query: 181 gtccctcagaaagtcttgatagctatgtttcccagtgtggagtcctttgggctttccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtccctcagaaagtcttgatagctatgtttcccagtgtggagtcctttgggctttccatc 440
Query: 241 tagggccttgcattttgggtccctggggatggtgtggctgccctgacccaatgcaagatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagggccttgcattttgggtccctggggatggtgtggctgccctgacccaatgcaagatc 500
Query: 301 acctagtagccagacatcttgctgaaggtgtgtgattggctgtcagccaaagagccctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctagtagccagacatcttgctgaaggtgtgtgattggctgtcagccaaagagccctcc 560
Query: 361 atacgtgaggcca 373
|||| ||||||||
Sbjct: 561 atacatgaggcca 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
