Query= MSMg01no433_f04.b1 MSMg01no433_f04.b1 CHROMAT_FILE:
MSMg01no433_f04.b1 PHD_FILE: MSMg01no433_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:23 2005
(447 letters)
>mm_chr15_84894920_84895763
Length = 844
Score = 814 bits (421), Expect = 0.0
Identities = 437/443 (98%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaattttataaccaatttgtttcaaaacaaaagcccttaaaagcaaaagaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaattttataaccaatttgtttcaaaacaaaagcccttaaaagcaaaagaaaa 264
Query: 65 ccatatacctcattcattgatgccataggaacctcaattggaatggcactgagcactcct 124
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 265 ccatatacctcattcattgatgccataggaacctccattggaatgacactgagcactcct 324
Query: 125 tagctgagtgggctatagttttttttctactaaaatggtaagagatttttttcttctatg 184
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 tagctgagtgggctatagttttttttctactaaaatggtaagagattttt--cttctatg 382
Query: 185 acacatgggtctaaacagaagactggcctgacctccacagggtcagggtaaagcttctat 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acacatgggtctaaacaga-gactggcctgacctccacagggtcagggtaaagcttctat 441
Query: 245 agctggtggctgttcaagagtatactcatttctaacgagactggggagactttggagaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agctggtggctgttcaagagtatactcatttctaacgagactggggagactttggagaca 501
Query: 305 ttgatactcgtggtactctgggcttccgatggctcctgctgccttcttggtcttcggtgt 364
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 502 ttgatactcgtggtactctgggcttccggtggctcctgctgccttcttggtcttcggtgt 561
Query: 365 ctggatacttggaaaggtccagagtcaacacatggctgaacatgcactcattgtgctgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctggatacttggaaaggtccagagtcaacacatggctgaacatgcactcattgtgctgaa 621
Query: 425 atggaggtagggcagttttagtc 447
|||||||||||||||||||||||
Sbjct: 622 atggaggtagggcagttttagtc 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 844
Length adjustment: 10
Effective length of query: 437
Effective length of database: 834
Effective search space: 364458
Effective search space used: 364458
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_f04.g1 MSMg01no433_f04.g1 CHROMAT_FILE:
MSMg01no433_f04.g1 PHD_FILE: MSMg01no433_f04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:23 2005
(355 letters)
>mm_chr15_85049094_85049848
Length = 755
Score = 656 bits (339), Expect = 0.0
Identities = 351/355 (98%)
Strand = Plus / Minus
Query: 1 cattagcaaggctgcactctaagtgggtgggtgggaactgagtcctgagctgcacggggg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 555 cattagcaaggctgcactctaagtgggtgggtgggaactgagtcctgagctgcatggggg 496
Query: 61 ccatctagtgtgttttaaaaggaatcctgttagaggaccttggacaccctgaaccatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccatctagtgtgttttaaaaggaatcctgttagaggaccttggacaccctgaaccatgtg 436
Query: 121 cgctcagcgggacaatcagatgttaaaactttcaggcagtctggaaacttggaatgtccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cgctcagcgggacaatcagatgttaaaactttcaggcagtctggaaacttggaatgtccc 376
Query: 181 tggaatgtggctccactgttcctgagcagagtgtcccaggcctgatacctgcagagcaga 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 375 tggaatgtggctccactgttcctaagcagagtgtcccaggcctgatacctgcagagcaga 316
Query: 241 gctgtctgagagctgtcagtgcctcccctgaggcttcaagggatcagctcaccgtccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gctgtctgagagctgtcagtgcctcccctgaggcttcaagggatcagctcaccgtccttg 256
Query: 301 agcctaagatgtctcataagtcagtggacagtgcttgcaatgcccccttaagaga 355
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggcctgagatgtctcataagtcagtggacagtgcttgcaatgcccccttaagaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
