Query= MSMg01no437_a18.b1 MSMg01no437_a18.b1 CHROMAT_FILE:
MSMg01no437_a18.b1 PHD_FILE: MSMg01no437_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:17 2005
(553 letters)
>mm_chr15_44684978_44685929
Length = 952
Score = 948 bits (490), Expect = 0.0
Identities = 538/556 (96%), Gaps = 9/556 (1%)
Strand = Plus / Plus
Query: 4 ggaattcttcactatagcttaaacattgtaataaaatatcattcaggcatattcg-tagt 62
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 204 ggaattcttcactagagcttaaacattgtaataaaatatcattcaggcatat-cggtagt 262
Query: 63 atgttatatgtgagagaaaaatccagagtttctttaggaagggagagtttttggaataac 122
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 263 atgttatatgtgagagaaaaatccagagtttctttaggaagggggagtttttggaataac 322
Query: 123 cttgatttatatttggtcatttgagattatccaacataatttatattagggagtatcagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttgatttatatttggtcatttgagattatccaacataatttatattagggagtatcagc 382
Query: 183 aatgtgtctttataactgtagacttctagaaaagttgagctttgtttaaataaaggccaa 242
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aatgtgtctttatgactgtagacttctagaaaagttgagctttgtttaaataaaggccaa 442
Query: 243 tgcgaagttgaaatttacaacagaggtttttgtgagagacttctttgtgctgtgaacaca 302
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tacgaagttgaaatttacaacagaggtttttgtgagagacttctttgtgctgtgaacaca 502
Query: 303 cgcatttgtattagaaataagctgtcacttgctatttgaaaaaaatcttcac-gttaagc 361
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 503 tgcatttgtattagaaataagctgtcacttgctatttgaaaaat-tcttcaccgttaagc 561
Query: 362 ttcataagactttctggaaaaaaaaaatgcttccatgctttctccaatatgctggactgg 421
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 562 ttcataagactttctggaaaaaaaaaa-gcttccatgctttctccaatatgctggactgg 620
Query: 422 tatgtcccaggggtacttgctgaattagagtcttctgtatatctgcactgtctgctatga 481
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 tatgtcccaggggtacttgctgaattagagtcttctgtatatctgtactgtctgctatgg 680
Query: 482 tagcttccaaacacatataggc----aagtatttggaatatagccaggaaaacagaagaa 537
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 681 tagcttccaaacacatataggcccgcaagcatttggaatatagccaggaaaacagaagaa 740
Query: 538 ctagacttttagtttg 553
||||||||||||||||
Sbjct: 741 ctagacttttagtttg 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 952
Length adjustment: 10
Effective length of query: 543
Effective length of database: 942
Effective search space: 511506
Effective search space used: 511506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_a18.g1 MSMg01no437_a18.g1 CHROMAT_FILE:
MSMg01no437_a18.g1 PHD_FILE: MSMg01no437_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:17 2005
(453 letters)
>mm_chr15_44889393_44890245
Length = 853
Score = 596 bits (308), Expect = e-174
Identities = 308/308 (100%)
Strand = Plus / Minus
Query: 146 tggttgaggctaagaagaacaattcagtcagaagctgagagaagccagagtgcatctgtc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tggttgaggctaagaagaacaattcagtcagaagctgagagaagccagagtgcatctgtc 794
Query: 206 agcttggagaggagtttgagccagaacagatacattggaccaaccagccagagtacagaa 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 agcttggagaggagtttgagccagaacagatacattggaccaaccagccagagtacagaa 734
Query: 266 agttctagaaaggatgagcttattcaagaataagctttgaagactacaattacatctgat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agttctagaaaggatgagcttattcaagaataagctttgaagactacaattacatctgat 674
Query: 326 gaataaaagttacttttgcacatctgtcttccaaaacaaaagttcaaagttaagactcac 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gaataaaagttacttttgcacatctgtcttccaaaacaaaagttcaaagttaagactcac 614
Query: 386 tgtgcgattttagtattatcttttgcagaaggtttaagacagtaactagagtgggtgggt 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgtgcgattttagtattatcttttgcagaaggtttaagacagtaactagagtgggtgggt 554
Query: 446 aggggagc 453
||||||||
Sbjct: 553 aggggagc 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
