NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAAGACCCAATGACCTTAAAGGACTTTTAGCCACACAGGCATTA
AGTGAACTGGGAAGGAAGTCAAGAGTCATGCAGAGAGCACAGGCCTTTGT
AATCAAGCCTAGTCCCCAGGAGAATTCGGTCTCTGCCTGGGCTTTGCAGT
AGAGCTCAGCATGGACCCTCTATGAGCAAGACTTAGGCTCTCACTGTTCT
CACTGGGAATTTGCTTTGTGCGGGTTTTCCCTCATACTCCAGCTTTTTAT
TACTTTCTCCCCACCCCCTGCCCTGTCCTATGGATTGATTTCTTCCTGGT
CTTGGACAGCGTCTCTATATCATTCATTTCTATCTCTGTGCTCCTTTAAC
AATGTGCACAAACCCCAGTGAAAGGAACGGACACTTTGCATTAGAATTAG
AAGTTTGTGTTAAGTCACTCATGCCAGGCTAGGAGCTCCTTCCTCTGTGC
TTTCTGTATTTATGGTTGCCATTGCAGGGGCTGGCATACAGCCTGACAAA
TAATTGGCACTTTAGAAGTGAGCTCTTAACCACTGTGAATGGATGGAGAG
GCTAACCTCACCCCCGCAGGTGAGAAAAATTCTCCCCGGCGATTTTAATT
TTTTTTTTCCATTTTTTTCCTGCCCGGCTTTGTTTATAGGGAAATTTCCT
ATTGGGCTGGCGCCCTTTGTAGGGGAAACCTCCACCTTATCTCTCTTTTA
CCCACCT

GAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTATCAT
GAATGGGTGTTGGATTTTGCCAAATGCTTTCTCAGCATCTAACGAGATGA
TCATGTCGTTTTTGTCTTTGAGTTTCCGTATATTGAACCATCCCTGCATC
CCTGGGATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGATGTGTTC
TTGGATTCCGTTAGCAAGAACTTTATTGAGGATTTTTGCATCAATATTCA
TAAGGGAAATTGGTCTGAATTTCTCTATCTTTGTTGGGTCTTTTTGTGGT
TTAGGTATCAGAGTAATTGTGTCTTCATAGAATGAGTTGGGTAGAGTACC
TTCTGTTTCTATTTTGTGAAATAGTTTGTGAAGAACTGGGATTAGATCTT
CTTTGAAGGTCTGATAGAACTCTGCACTAAACCCATCTGGTCCTGGGCTT
TTTTTGGTTGGGAGACTATTAATGACTGCTTCTATTTCTTTGGGGGAAAT
AGGGCTCTTTAGATCGTTAACCTGGTCTTGATTCAACTTTGGTACCTGGT
ATCTGTCTAGAAACTTGTCCATTTCATCCAGGTTCTCCAGTATTGCTGAG
TATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGTATTTCCTCAGGATC
TGTTGNGATTTCTCCCTTTTCATTTCTGATTTTGTAATTACAAAGCTTTC
N

Query= MSMg01no444_n17.b1 MSMg01no444_n17.b1 CHROMAT_FILE:
MSMg01no444_n17.b1 PHD_FILE: MSMg01no444_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:53 2005
         (489 letters)



>mm_chr15_44020102_44020990
          Length = 889

 Score =  915 bits (473), Expect = 0.0
 Identities = 482/485 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagacccaatgaccttaaaggacttttagccacacaggcattaagtgaactggg 64
           ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagacccaaggaagttaaaggacttttagccacacaggcattaagtgaactggg 264

                                                                       
Query: 65  aaggaagtcaagagtcatgcagagagcacaggcctttgtaatcaagcctagtccccagga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggaagtcaagagtcatgcagagagcacaggcctttgtaatcaagcctagtccccagga 324

                                                                       
Query: 125 gaattcggtctctgcctgggctttgcagtagagctcagcatggaccctctatgagcaaga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaattcggtctctgcctgggctttgcagtagagctcagcatggaccctctatgagcaaga 384

                                                                       
Query: 185 cttaggctctcactgttctcactgggaatttgctttgtgcgggttttccctcatactcca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttaggctctcactgttctcactgggaatttgctttgtgcgggttttccctcatactcca 444

                                                                       
Query: 245 gctttttattactttctccccaccccctgccctgtcctatggattgatttcttcctggtc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctttttattactttctccccaccccctgccctgtcctatggattgatttcttcctggtc 504

                                                                       
Query: 305 ttggacagcgtctctatatcattcatttctatctctgtgctcctttaacaatgtgcacaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttggacagcgtctctatatcattcatttctatctctgtgctcctttaacaatgtgcacaa 564

                                                                       
Query: 365 accccagtgaaaggaacggacactttgcattagaattagaagtttgtgttaagtcactca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accccagtgaaaggaacggacactttgcattagaattagaagtttgtgttaagtcactca 624

                                                                       
Query: 425 tgccaggctaggagctccttcctctgtgctttctgtatttatggttgccattgcaggggc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgccaggctaggagctccttcctctgtgctttctgtatttatggttgccattgcaggggc 684

                
Query: 485 tggca 489
           |||||
Sbjct: 685 tggca 689


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space:   421041
Effective search space used:   421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)