Query= MSMg01no447_e09.b1 MSMg01no447_e09.b1 CHROMAT_FILE:
MSMg01no447_e09.b1 PHD_FILE: MSMg01no447_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:06 2005
(585 letters)
>mm_chr15_89467117_89468102
Length = 986
Score = 1002 bits (518), Expect = 0.0
Identities = 557/570 (97%), Gaps = 3/570 (0%)
Strand = Plus / Minus
Query: 18 aaagaaaaaatagtggatctacaaggattctgcttatacatggctgtaaagtcacttgaa 77
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 786 aaagaaaaaatagtggatctacaaggattctgcttatacatgactgtaaagtcactttta 727
Query: 78 aaatagtttttaaactagaaaatctgtatgtgcttgcagttccatccctcaggaaaatga 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aaatagtttttaaactagaaaatctgtatgtgcttgcagttccatccctcaggaaaatga 667
Query: 138 gccagtagaaggagttcagtgccagcctaggttcttgcatagtactctctcaaaacacag 197
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 666 gccagtagaaggagttcagtgccagcctaggttcttgcatagcactctctcaaaacacag 607
Query: 198 acaaataaaaattataaggaccaattgtttgtttagaaacaacagttcataatttgnt-a 256
||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |
Sbjct: 606 acaaataaaaattataaggaccaattgtttgtttagaaacaacagttcagaatgtg-taa 548
Query: 257 gaaccagtttttttttcccacagatctcttgctgatgtctagattg-aaaaaaaatgcaa 315
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 547 gaaccaggttttttttcccacagatctcttgctgatgtctagattgaaaaaaaaatgcaa 488
Query: 316 ttacaaatctagatagaaatgattaaaatagatttcactaaattcctacctagacttaat 375
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 487 ttacaaatctagatagaaatgattaaaataggtttcactaaattcctacctagacttaat 428
Query: 376 agcaagttcttccaacagtagagcctgagactgaaaaaaccacaaagggaagccttccat 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agcaagttcttccaacagtagagcctgagactgaaaaaaccacaaagggaagccttccat 368
Query: 436 gtgagcatgggcttcatgatgttaataatgagctcggctgactcactggtatatctcagt 495
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 367 gtgagcatgggcttcatgatgttaatgatgagctcggctgactcactggtatatctcagt 308
Query: 496 ggaaaagatagcatcttgtcaaagccatctgaaatcatctgttattcctaagacagactc 555
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 307 ggaaaagatagcatcttgtcaaagccgtctgaaatcatctgttattcctaagacagactc 248
Query: 556 agatctctagataccagcctcctgggagtg 585
||||||||||||||||||||||||||||||
Sbjct: 247 agatctctagataccagcctcctgggagtg 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 986
Length adjustment: 10
Effective length of query: 575
Effective length of database: 976
Effective search space: 561200
Effective search space used: 561200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_e09.g1 MSMg01no447_e09.g1 CHROMAT_FILE:
MSMg01no447_e09.g1 PHD_FILE: MSMg01no447_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:07 2005
(241 letters)
>mm_chr15_89332038_89332678
Length = 641
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 1 tcttccaggagggatttgcttcacattttacaggtgaggcagagggcttgagtcacctgc 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttccaggagggatttgctacacattttacaggtgaggcagagggcttgagtcacctgc 260
Query: 61 tgtgactgcccggtgaagctggctcagatctgtctgactaggtaggccctgtggcctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgactgcccggtgaagctggctcagatctgtctgactaggtaggccctgtggcctggg 320
Query: 121 tacacttaacctgtatagtgtctttgcatctgggacctactcccagatatagagtatagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacacttaacctgtatagtgtctttgcatctgggacctactcccagatatagagtatagg 380
Query: 181 gcctgactctattcactttctttttgagggggtactaaacccctcctgggtgtccagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctgactctattcactttctttttgagggggtactaaacccctcctgggtgtccagggg 440
Query: 241 g 241
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
