CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTATTTATTACAGATTGAGGGGGCTGGTGAGATGGCTCAGTGGTTAA
GAGCATTGACTGTTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCAT
ATGGTGGCTCACAACCATCTGTTACAAGATCTGACTCACTTTTCTGGTGT
GTCTGAAGACAGCTACAGTGTGCTTACATATAATAAATAAATAAATATTT
TTTTAAAAGATTAGATTGAAAGAGGAGAAAGAAAGTAAGGAAGTGGACTT
GTGAAAATTACCAAAAGGATTGCTAGCAATATAAATTGCTAATAAAGGCT
CTTGTTCTTCTAATAGTGTTGGTTTACAGCACAAGACATCTTCTGTACTG
TGCACAGACTTTTCAATCTCACAATAGCGTTATTAAAATCTAAGAGTGGA
TTTTTAAAAAATGTTTGCCAAAGATTTTTCTAAGAACTCGTGTGTATAAA
ACTAACAGAATCCAAAGAAATCTTTTTTTTTCCTGTTCACTGTAGCTCCC
AAGTTTTCGAGGTAGCTAGAGAGAAATAAATCCTGAAAGCGTAACTAAGC
ACCTCAGTCATTTATTTGATGATACAAATGTTATGAGATGTTTGCTTTAT
TTATGCATAAAATGGATGCACAGTAAATATCTTGTGAGTTACTGTACATA
TAAATTCTATGAAATTATTCTTTCTGAAAAAGAATGAAATTTGTAGCTGT
AATGAAGAAAAAACAAAAGTATTGGAG

NCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCAGGGGTTAGCCATTGGTCAGCTTT
CATTGCTCAAGTGAAGAATGCTCTCCCAACACATGTTCATGCAAATCAAC
TTTAATTAAATGCAGTGGAACACACACACACACACACACACACACACACA
CACACACACACACACACACGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGGAGGGGGATGTTNTTTTTTTTTTTTTTTTTTTT
TTTTNTTTTTTTNNNNNTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTNTNNNTNCTCTCNTNNTNTNNNTTTTTTTTTTNTTTT
TTTTTTTTTTTTNTTTTTTNNTTTTCCCCCCTTTTTCCCTCCCTCTCTTC
CTCTCTTTTCCTTTTCCCCCCCCCCTTCTTTTCCTTTTTTCTCCTTTTTC
CTCCCCTTTTCCTTCTTTCCTCCTTCCCTCCCTCTTTTCTCCTCTTTTTC
TCCCTCTTTCCTCCTCTCTTCCCTCTTTCTTTTCCCTCTTCTTTTCCCCT
TCTTTTCCTTTCTTTCCTCCTTTCCCTCTTTTCTTTCTCTTCCCCTCTCC
TCNTNTTCCCTCCTTTCCCTCCCCCTCCTTTTTTCCCCCTTCTTCCTTCC
TTTTCTCCTTCCTTCCTTCCTTCCTTCCCTCCCCCTTTTCCTTCCCTTCT
TTCTTTCTTCCNTTCCCTCCTTCTTCTTTCCCCTTCCTCCTTTTCTTCTT
TCCTCCTCTTTCCTTCTCCTTCTCTTTTTCTCTTTCTTCGCCTTCCCCCT
CCCTTCTTTTTTTCCCTTCTTTTCCTTTCCTTTTTN

Query= MSMg01no450_o19.b1 MSMg01no450_o19.b1 CHROMAT_FILE:
MSMg01no450_o19.b1 PHD_FILE: MSMg01no450_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:00 2005
         (554 letters)



>mm_chr15_50064925_50065879
          Length = 955

 Score =  911 bits (471), Expect = 0.0
 Identities = 540/579 (93%), Gaps = 28/579 (4%)
 Strand = Plus / Plus

                                                                       
Query: 4   agggggctggtgagatggctcagtggttaagagcattgactgttcttccagaggtcctga 63
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 177 agggggctggtgagatggctcagtggttaagagcattgactgttcttccaaaggtcctga 236

                                                                       
Query: 64  gttcaaatcccagcaaccatatggtggctcacaaccatctgttacaagatctgactcact 123
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 237 gttcaaatcccagcaaccatatggtggcccacaaccatctgttacaagatctgactcact 296

                                                                       
Query: 124 tttctggtgtgtctgaagacagctacagtgtgcttacatataataaataaataaat---- 179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 297 gttctggtgtgtctgaagacagctacagtgtgcttacatataataaataaataaataaat 356

                                                                       
Query: 180 ------------------at---tttttt--aaaagattagattgaaagaggagaaagaa 216
                             ||   | ||||  ||||| ||| |||||||||||||||||||
Sbjct: 357 aaataaataaataaataaataaatattttaaaaaaggttaaattgaaagaggagaaagaa 416

                                                                       
Query: 217 agtaaggaagtggacttgtgaaaattaccaaaaggattgctagcaatataaattgctaat 276
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 417 agtaaggaagtggacttgtgaaaattaccaaaaggattgctagcaatctaaattgctaat 476

                                                                       
Query: 277 aaaggctcttgttcttctaatagtgttggtttacagcacaagacatcttctgtactgtgc 336
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aaaggctcttgttcttttaatagtgttggtttacagcacaagacatcttctgtactgtgc 536

                                                                       
Query: 337 acagacttttcaatctcacaatagcgttattaaaatctaagagtggatttttaaaaaatg 396
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atagacttttcaatctcacaatagcgttattaaaatctaagagtggatttttaaaaaatg 596

                                                                       
Query: 397 tttgccaaagatttttctaagaactcgtgtgtataaaactaacagaatccaaagaaatct 456
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 597 tttgccaaagatttttctaagaactcgtgtgtataaaaataacagaatccaaagaaatct 656

                                                                       
Query: 457 tttttttt-cctgttcactgtagctcccaagttttcgaggtagctagagagaaataaatc 515
           |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 657 tttttttttcctgttcactgtagctcccaagttttctaggtagctagagagaaataaatc 716

                                                  
Query: 516 ctgaaagcgtaactaagcacctcagtcatttatttgatg 554
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ctgaaagcgtaactaagcacctcagtcatttatttgatg 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 955
Length adjustment: 10
Effective length of query: 544
Effective length of database: 945
Effective search space:   514080
Effective search space used:   514080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)