Query= MSMg01no451_g04.b1 MSMg01no451_g04.b1 CHROMAT_FILE:
MSMg01no451_g04.b1 PHD_FILE: MSMg01no451_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:37 2005
(227 letters)
>mm_chr15_96564831_96565460
Length = 630
Score = 406 bits (210), Expect = e-118
Identities = 222/228 (97%), Gaps = 5/228 (2%)
Strand = Plus / Minus
Query: 1 aagaaaacaactacaacatttttttaagcctctggcatgataaaatgtcaaccagattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aagaaaacaactacaacatttttttaagcctctggcatgataaaatgtcaaccagattaa 368
Query: 61 atataatagcaagtatgtggcacacatctggagaatttcctaaaaacatacaaaattatc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atataatagcaagtatgtggcacacatctggagaatttcctaaaaacatacaaaattatt 308
Query: 121 atggcacttcatcatttccttcctgattgccaact----catggtnctcaggtccaaaag 176
||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 307 atggcacttcatcatttccttcctgattgccaactcatgcatggt-ctcaggtccaaaag 249
Query: 177 gcccattctgaactgcgtgtctatttataatagtgtgctcattgtctt 224
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gcccattctgaactgcgtgtctatttataatagtgtgctcattgtctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 630
Length adjustment: 9
Effective length of query: 218
Effective length of database: 621
Effective search space: 135378
Effective search space used: 135378
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no451_g04.g1 MSMg01no451_g04.g1 CHROMAT_FILE:
MSMg01no451_g04.g1 PHD_FILE: MSMg01no451_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:37 2005
(258 letters)
>mm_chr15_96418746_96419403
Length = 658
Score = 478 bits (247), Expect = e-139
Identities = 253/255 (99%)
Strand = Plus / Plus
Query: 1 acagtgagtagcgatgtaactcagtagtggaccatttgggtagcacacatcaggtcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtgagtagcgatgtaactcagtagtggaccatttgggtagcacacatcaggtcttga 260
Query: 61 gtttgatccccactaccacaagacaaataacaaaacagaagacaacgcaacttagtggga 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgatccccaataccacaagacaaataacaaaacagaagacaacgcaacttagtggga 320
Query: 121 gattttcattttctgggcttttcttacagaagactgtaagctgtgctactgaaaatgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattttcattttctgggcttttcttacagaagactgtaagctgtgctactgaaaatgctg 380
Query: 181 agtctactctggttccagagccttctcttccccgctccagctcagggaaaaggcttctca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtctactctggttccagagcctcctcttccccgctccagctcagggaaaaggcttctca 440
Query: 241 gagggctgcaccacg 255
|||||||||||||||
Sbjct: 441 gagggctgcaccacg 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
