NAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTC
TTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTC
ATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATCGCTGT
TCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTG
ATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCG
CATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAA
TGCTGTCTTTCTTCCACTGGGTGGTTTTAGCTCCCTTGTCGAAGATCAAG
TGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTG
GTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTG
CTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTT
TTATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGAA
CAN

CCCGATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACTGGGTCTGTGGAAATGTAAA
CATGAGCCCAAACATCATCATTTCAATGCTGTTTTGTAAATTATAACATT
GTTCTCATTTATATTTTCATATAGATATAAATAAATATTAAATAAGCATA
CATATCTAATTAGAATTCTTGGAAACGTTAATTGTGCCGCCAACTTTGGG
AAAAAGCATTCTAGTTTATCAGGCTGAATTGGCATCAAAGAGAAATAAAC
AGCTATATGAATCTAAAACTACATATTTTTTTTTAACTTCAACTGGAGTA
ACACACTGCCCAGCTTAACTTCAATTTCTGCTGCTATGATAAAAATAGTC
TGATAAAACACAGAGTGATGGAAAGAAGAGTTTAACTCAGCTTGTAATAT
CAGGTTACAAACAATATTGTGAGAAAATCAAGGCAGGAACTTTAATCAGC
TAGTTACCTTTCAAACACAGTCAAGATCAGAGAGAAATACACACATTCTT
GCATATTTGCTTTCATGTTTCTGTCCACTCAGTTTCAATACTCGTATACA
GTTCAAGACTTCCTACCTAGGGAATGGTACCACCCACAATGGGCTGAGTC
TTCCCATATCCATGAATTTAATTAAGTTAATCACCCATAGACATATCTAC
AGGCAGCCAAATCTAGTTCTCTTCCCAATGCAGCCCTAATTTGCTTATTT
ATAGTCN

Query= MSMg01no453_k17.g1 MSMg01no453_k17.g1 CHROMAT_FILE:
MSMg01no453_k17.g1 PHD_FILE: MSMg01no453_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:37 2005
         (675 letters)



>mm_chr15_62592937_62594010
          Length = 1074

 Score = 1141 bits (590), Expect = 0.0
 Identities = 599/602 (99%), Gaps = 1/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgggtctgtggaaatgtaaacatgagcccaaacatcatcatttcaatgctgttttgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actgggtctgtggaaatgtaaacatgagcccaaacatcatcatttcaatgctgttttgta 542

                                                                       
Query: 61  aattataacattgttctcatttatattttcatatagatataaataaatattaaataagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aattataacattgttctcatttatattttcatatagatataaataaatattaaataagca 482

                                                                       
Query: 121 tacatatctaattagaattcttggaaacgttaattgtgccgccaactttgggaaaaagca 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacatatctaattagaattcttgaaaacgttaattgtgccgccaactttgggaaaaagca 422

                                                                       
Query: 181 ttctagtttatcaggctgaattggcatcaaagagaaataaacagctatatgaatctaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttctagtttatcaggctgaattggcatcaaagagaaataaacagctatatgaatctaaaa 362

                                                                       
Query: 241 ctacatatttttttttaacttcaactggagtaacacactgcccagcttaacttcaatttc 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctacat-tttttttttaacttcaactggagtaacacactgcccagcttaacttcaatttc 303

                                                                       
Query: 301 tgctgctatgataaaaatagtctgataaaacacagagtgatggaaagaagagtttaactc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgctgctatgataaaaatagtctgataaaacacagagtgatggaaagaagagtttaactc 243

                                                                       
Query: 361 agcttgtaatatcaggttacaaacaatattgtgagaaaatcaaggcaggaactttaatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agcttgtaatatcaggttacaaacaatattgtgagaaaatcaaggcaggaactttaatca 183

                                                                       
Query: 421 gctagttacctttcaaacacagtcaagatcagagagaaatacacacattcttgcatattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gctagttacctttcaaacacagtcaagatcagagagaaatacacacattcttgcatattt 123

                                                                       
Query: 481 gctttcatgtttctgtccactcagtttcaatactcgtatacagttcaagacttcctacct 540
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gctttcatgtttgtgtccactcagtttcaatactcgtatacagttcaagacttcctacct 63

                                                                       
Query: 541 agggaatggtaccacccacaatgggctgagtcttcccatatccatgaatttaattaagtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  agggaatggtaccacccacaatgggctgagtcttcccatatccatgaatttaattaagtt 3

             
Query: 601 aa 602
           ||
Sbjct: 2   aa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1074
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1064
Effective search space:   707560
Effective search space used:   707560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)