Query= MSMg01no453_o03.b1 MSMg01no453_o03.b1 CHROMAT_FILE:
MSMg01no453_o03.b1 PHD_FILE: MSMg01no453_o03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:54 2005
(595 letters)
>mm_chr15_92471887_92472881
Length = 995
Score = 1122 bits (580), Expect = 0.0
Identities = 589/592 (99%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtatacaatgctggccttgaactcagaaatctgcctgcctctgcctcc 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgtagacaatgctggccttgaactcagaaatctgcctgcctctgcctcc 263
Query: 64 caagtgccgggattaaaggtgttgcactaccactgcctggcaacactgttaaatatgtta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caagtgccgggattaaaggtgttgcactaccactgcctggcaacactgttaaatatgtta 323
Query: 124 atatgtatactaacttaaacccgttgtaacttgagaagcttatttttagtttccttttag 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 atatgtatactaacttaaacccgttgtaacttgagaagcttatttttggtttccttttag 383
Query: 184 aaatctgcacactagttgtattatatctaaacacgttacagaacatgatacgtattgata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatctgcacactagttgtattatatctaaacacgttacagaacatgatacgtattgata 443
Query: 244 atttgtatgatgccaaggtagagcattgagtaggacacaaacccattcgttctccacagc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttgtatgatgccaaggtagagcattgagtaggacacaaacccattcgttctccacagc 503
Query: 304 cctgtgcgcctatgctcctcatccatgaaagcaaacacaaccgtgatagtggcagcaaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cctgtgcgcctatgctcctcatccatgaaagcaaacacaaccgtgatagtggcagcaaca 563
Query: 364 catttgtagattttgaaacaataaatctaattttatataatcacagggaatgtgatccct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catttgtagattttgaaacaataaatctaattttatataatcacagggaatgtgatccct 623
Query: 424 tcaccataggaggtgaaaatgacacagtattgctcatgggaaccaagggcttctgggaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcaccataggaggtgaaaatgacacagtattgctcatgggaaccaagggcttctgggaaa 683
Query: 484 aagaaaatcagacggaactatgctaacgtttgacaaaaacttggttgaagtcaggttgtg 543
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagaaaatcagatggaactatgctaacgtttgacaaaaacttggttgaagtcaggttgtg 743
Query: 544 taatgaactcccatcggtgggcaaagggcaagcacgtgtagagacgttccaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taatgaactcccatcggtgggcaaagggcaagcacgtgtagagacgttccaa 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_o03.g1 MSMg01no453_o03.g1 CHROMAT_FILE:
MSMg01no453_o03.g1 PHD_FILE: MSMg01no453_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:54 2005
(603 letters)
>mm_chr15_92670366_92671367
Length = 1002
Score = 878 bits (454), Expect = 0.0
Identities = 551/624 (88%), Gaps = 66/624 (10%)
Strand = Plus / Minus
Query: 1 ttaactgcacaaattaaaggcactgtgaaagaagagtgtagtgctgccggaagtatctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttaactgcacaaattaaaggcactgtgaaagaagagtgtagtgctgccggaagtatctag 564
Query: 61 cttccgctgtaagggtgtgctggactaaagccaccggtgagctccatagctcgctcgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cttccgctgtaagggtgtgctggactaaagccaccggtgagctccatagctcgctcgcat 504
Query: 121 gagtggtgcacctgttgggctctgtctctcaattgccatctttcttgccaaagaaaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gagtggtgcacctgttgggctctgtctctcaattgccatctttcttgccaaagaaaaaca 444
Query: 181 cctgaatgctgctacatttcatttggggaataaaaggaggtgcccgtgtagctgctctgt 240
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 443 cctgaatgctgctacatttcatttggggaataaaaggaggcgcccatgtagctgctctgt 384
Query: 241 ctgtgttgcatacagatcaatcactagacttctgagcacggctgctgtattagaaagcat 300
||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 383 ctgtgttgcatacagatcaatcactaggcttctgagaacggctgctgtattaggaagcat 324
Query: 301 tagaaagcatgggcacactctgggtggacatcttgaattttgcttgaccagaacatcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tagaaagcatgggcacactctgggtggacatcttgaattttgcttgaccagaacatcctg 264
Query: 361 tatccagtccagtcgcagggcagctataatatgcttgtaaaataacaatttctcatcatt 420
||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tattcaggc-agtcgcagggcagctataatatgcttgtaaaataacaatttctcatcatt 205
Query: 421 tgtcccctcc--tc----tccctccct-----------------------cccttcctcc 451
|||||||||| || ||||||||| ||||||||||
Sbjct: 204 tgtcccctcccctcccgctccctcccttccgcctcctttcccccctccctcccttcctcc 145
Query: 452 ctccctccc------------------------------------attgtttccttttcc 475
||||||||| |||||||||||||||
Sbjct: 144 ctccctccctccctccctccctccctccctccctccctccctcccattgtttccttttcc 85
Query: 476 tccctcccaacttctttccctttcttcaaaagacagcagccttgctgcatactaatgagg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tccctcccaacttctttccctttcttcaaaagacagcagccttgctgcatactaatgagg 25
Query: 536 caattcttggccttaccccttcat 559
||||||||||||||||||||||||
Sbjct: 24 caattcttggccttaccccttcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1002
Length adjustment: 10
Effective length of query: 593
Effective length of database: 992
Effective search space: 588256
Effective search space used: 588256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
