Query= MSMg01no455_i06.b1 MSMg01no455_i06.b1 CHROMAT_FILE:
MSMg01no455_i06.b1 PHD_FILE: MSMg01no455_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:03 2005
(540 letters)
>mm_chr15_92156479_92157418
Length = 940
Score = 967 bits (500), Expect = 0.0
Identities = 527/536 (98%)
Strand = Plus / Minus
Query: 5 gaattcttctctcctcttccttccttccttcttggatggtcttaatgtctgtctatgccc 64
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaattcttctctcgtcttccctccttccttcttggatggtcttaatgtctgtctatgccc 681
Query: 65 gaggtcatggtgggggaggggtctgaaatctgaatctaggtgagacagctgaacctgtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaggtcatggtgggggaggggtctgaaatctgaatctaggtgagacagctgaacctgtga 621
Query: 125 cactgaccagacatgaagctggatgctatggacccacatcttcaggtacagaaactctat 184
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 620 cactgaccagccatgaagctggatgctatggacccgcatcttcaggtacagaaactctat 561
Query: 185 gttgtgtgtgcattacttcagttattggtgacatgacatatttagaaaatacccatttgc 244
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 560 gttgtgtgtgcattacttcagttattggtgacatgacatgttcagaaaatacccatttgc 501
Query: 245 atgctccaaagtgttccagtacttgtgggtaaattcctctcttgatactaagaatgggta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgctccaaagtgttccagtacttgtgggtaaattcctctcttgatactaagaatgggta 441
Query: 305 ggtatggaagggttccttcttcattgtgagagtagattcagatatgtaccagtctgtcag 364
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtatggaagggttccttcttcatggtgagagtagattcagatatgtaccagtctgtcag 381
Query: 365 ggctgtggaccccaaattagacattgtcctttgtttaatatcactctttttgagacttta 424
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 ggctgtggaccccaaattagacattgtcctttatttaatatcactctttttgagacttta 321
Query: 425 attaacagtcatttgcaccattagtcgagatgaaagagatttggtactgccaaagtacag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attaacagtcatttgcaccattagtcgagatgaaagagatttggtactgccaaagtacag 261
Query: 485 gctcagattaacttaaatattcattttcacctctgattttctttctgaacgaagct 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 260 gctcagattaacttaaatattcattttcacctctgattttctttctgaatgaagct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_i06.g1 MSMg01no455_i06.g1 CHROMAT_FILE:
MSMg01no455_i06.g1 PHD_FILE: MSMg01no455_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:03 2005
(522 letters)
>mm_chr15_92038393_92039309
Length = 917
Score = 926 bits (479), Expect = 0.0
Identities = 510/523 (97%), Gaps = 7/523 (1%)
Strand = Plus / Plus
Query: 1 aagaatgccaaagtcttgagcttgaggtgacctctagagaaaagatacaaagggctacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaatgccaaagtcttgagcttgaggtgacctctagagaaaagatacaaagggctacag 260
Query: 61 ctttaaactcatcaaaggagtagagggaaagacaaagaaacttgacagaccaaaaatggc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ctttaaactcatcaatggagtagagggaaagacaaagaaacttgacagaccaagaatggc 320
Query: 121 tggggattcttttctctttcttaatgtgaaaccttttagattcctgtttcctccaaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggattcttttctctttcttaatgtgaaaccttttagattcctgtttcctccaaccaa 380
Query: 181 acttgagcgaaaaattgtctccaaactggaacagggagataacctagagctc-aagaccc 239
|||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||
Sbjct: 381 acttgagcgaaaaattgtctccaaactggaacagggaggtaacctagag-tccaagaccc 439
Query: 240 ttccaccaaggaaaacactcatcagcctgactctcaagtaacgttgtatacattctagtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttccaccaaggaaaacactcatcagcctgactctcaagtaacgttgtatacattctagtc 499
Query: 300 tttgtctcgactttttataaattgtatggtggccactacctctccattagccaaactata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttgtctcgactttttataaattgtatggtggccactacctctccattagccaaactata 559
Query: 360 aataaaactggtgcatttttggtaccaatttatgttttctaatttctttgaacaagcgaa 419
||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 560 aataaaactggtgcatttttggtaccagtttatgtttcccaatttctttgaacaagcgaa 619
Query: 420 ggtggtcgggtagctgactgatgagtcctgtggtgtgtcctcatgagagaaatgcttaga 479
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 620 ggtggtcgggtagctgactgatgagtcctgtg-----tcctcatgagagaaatgcttaga 674
Query: 480 gcagtttccttaagagattagctgtgctgtgctgctgatggat 522
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gcagtttccttaagagattagctgtgctgtgctgctgatggat 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 917
Length adjustment: 10
Effective length of query: 512
Effective length of database: 907
Effective search space: 464384
Effective search space used: 464384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
