Query= MSMg01no456_c22.b1 MSMg01no456_c22.b1 CHROMAT_FILE:
MSMg01no456_c22.b1 PHD_FILE: MSMg01no456_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:55 2005
(442 letters)
>mm_chr15_39086713_39087554
Length = 842
Score = 764 bits (395), Expect = 0.0
Identities = 431/443 (97%), Gaps = 2/443 (0%)
Strand = Plus / Plus
Query: 1 attaaattttaagtaaaagtttttgtcttgttgactatgcagttcaagcatttaataaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 attaaattttaagtaaaagtttttgtcttgttgactatgcagttcaagcatttaatcaca 260
Query: 61 tttcttggttgagtagagagatggaaaggcaactcatacaatatgccagtggttaggaca 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tttcttggttgagtagagagatggaaaggtaactcatacaatatgccagtggttaggaca 320
Query: 121 catgtcagtgtgtaagggttcagaaactgtgtagacagataaagggaatgaacatattgg 180
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 321 catgtcagtgtgtaagggttcagaaactgtgcagacagataaagggaacgaacatattgg 380
Query: 181 aataaaaagcttaaggtatgttttggtatttcaaaaatatgttaattttaagaattgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataaaaagcttaaggtatgttttggtatttcaaaaatatgttaattttaagaattgttt 440
Query: 241 ttactgtttaatgaaaatatgaaattccaaataccatatttatgttgtgtgttgttctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 ttactgtttaatgaaaatatgaaattccaaataccatatttatgttgtgggttgttctaa 500
Query: 301 tatctttatgtctataagttgtttatatcaaataggaactgtcatcaactcgactaatat 360
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 tatctctatgtctataagttgtttatatcaaataggaactgtcatcaacttgactaatat 560
Query: 361 ttcttgtatactaacaataaaacctgaacaccatagact-aaagaaaataaatcatatac 419
||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||
Sbjct: 561 ttcttgtatactaacaataaaacctgaacaccaaaga-tcaaagaaaacaaatcatatac 619
Query: 420 tcaatgaatcaacttaggaaatc 442
||||||||| |||||||||||||
Sbjct: 620 tcaatgaattaacttaggaaatc 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_c22.g1 MSMg01no456_c22.g1 CHROMAT_FILE:
MSMg01no456_c22.g1 PHD_FILE: MSMg01no456_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:55 2005
(423 letters)
>mm_chr15_39222799_39223621
Length = 823
Score = 818 bits (423), Expect = 0.0
Identities = 423/423 (100%)
Strand = Plus / Minus
Query: 1 taaacagcagtgagctttctgggcattccccgctgaagtgtgaggctgggctgctttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taaacagcagtgagctttctgggcattccccgctgaagtgtgaggctgggctgctttcaa 564
Query: 61 gcactctacccatatctctctaagcctattaaaaacacgcaatgaatatatgctgtcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcactctacccatatctctctaagcctattaaaaacacgcaatgaatatatgctgtcgtc 504
Query: 121 aggactttctgcacatctggctgccagcaataaaaatctcacaagtaataaaaatgggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aggactttctgcacatctggctgccagcaataaaaatctcacaagtaataaaaatgggac 444
Query: 181 aaggtatcttctcaatgttgctactggaaaagaagagaaattatgcattttcccagcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaggtatcttctcaatgttgctactggaaaagaagagaaattatgcattttcccagcctc 384
Query: 241 tttctcctttggaaaatgaatgactccagccacagaatgtatctcttcgagctactgcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttctcctttggaaaatgaatgactccagccacagaatgtatctcttcgagctactgcat 324
Query: 301 aggaccaaaacactaaaaataagtgctctgatctcctttcagaatcatgaagcaataaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aggaccaaaacactaaaaataagtgctctgatctcctttcagaatcatgaagcaataaaa 264
Query: 361 atatgacagacaacagctcctaccacctacatctttatcctgtacttctacggcgcagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atatgacagacaacagctcctaccacctacatctttatcctgtacttctacggcgcagca 204
Query: 421 cat 423
|||
Sbjct: 203 cat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
