Query= MSMg01no458_n12.b1 MSMg01no458_n12.b1 CHROMAT_FILE:
MSMg01no458_n12.b1 PHD_FILE: MSMg01no458_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:33 2005
(477 letters)
>mm_chr15_29377344_29378220
Length = 877
Score = 857 bits (443), Expect = 0.0
Identities = 467/481 (97%), Gaps = 12/481 (2%)
Strand = Plus / Plus
Query: 1 agatgttaaaggaaaaacagactgtagaaacattgttatttttatggatttttataaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgttaaaggaaaaacagactgtagaaacattgttatttttatggatttttataaata 260
Query: 61 ttcttgaaaagcaatgacctatatttagtatgttcaaacagagctcagcattataaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttgaaaagcaatgacctatatttagtatgttcaaacagagctcagcattataaacaa 320
Query: 121 acaaacaaacaaacaaataaatgagagaaaaatcatttaagagtaatataccagagttaa 180
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaacaaacaaa----taaatgagagaaaaatcatttaagagtaatataccagagttaa 376
Query: 181 aacttttattactaatgtaactagaaaattcaaaaggaagtgtgggttgtctggcggggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aacttttattactaatgtaactagaaaattcaaaaggaagtgtgggttgtctggcggggc 436
Query: 241 tccggt----ttattttatgctatttatgtgaaagctggcttctgttgctgtttggatgg 296
||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tccggggaactaa----atgctatttatgtgaaagctggcttctgttgctgtttggatgg 492
Query: 297 tgcctgaaaaaaagccaagagctttagaattttatatcaggaaatgaaactttcagagca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgcctgaaaaaaagccaagagctttagaattttatatcaggaaatgaaactttcagagca 552
Query: 357 actcagcaatcacaggtgtgtgctatcctcttgccaatgttctaaattttatgaatttta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 actcagcaatcacaggtgtgtgctatcctcttgccaatgttctaaattttatgaatttta 612
Query: 417 aattgcactatttaattgccccattttagcaaatgagatttttttcagaacagtgagtga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aattgcactatttaattgccccattttagcaaatgagatttttttcagaacagtgagtga 672
Query: 477 t 477
|
Sbjct: 673 t 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_n12.g1 MSMg01no458_n12.g1 CHROMAT_FILE:
MSMg01no458_n12.g1 PHD_FILE: MSMg01no458_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:33 2005
(324 letters)
>mm_chr15_29538465_29539188
Length = 724
Score = 588 bits (304), Expect = e-172
Identities = 319/324 (98%)
Strand = Plus / Minus
Query: 1 aaataaatcatgtatattaatagatgtaaacacaacaggggttttgaacatttgattgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aaataaatcatgtatattaatagatgtaaacacaacaggggttttgaacatttgattgaa 465
Query: 61 atatcattaagttctaatggctagcgaaagtcttgttatgcccttcctttcaaataaaag 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 464 atatcattaagttctaatggctagcggaagtcttgttatgcccttcctttcaaataaaag 405
Query: 121 caatcattacaattgactctttttaaagcatttaatacaaaataaaatggaagtagctca 180
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 404 caatcattacaattgactctttttaaagcatttaatacaatataagatggaagtagctca 345
Query: 181 tctttaacaacaacggctgattcttattctaagatgtgtgggctgatggtccaaagtgca 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tctttaacaacaatggctgattcttattctaagatgtgtgggctgatggtccaaagtgca 285
Query: 241 attttgagccaacattggtcgctcctcccatgaagaaacagctaacatttttatatgtta 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 284 attttgagccaacattggtcactcctcccatgaagaaacagctaacatttttatatgtta 225
Query: 301 ataattcatataatcatgagagga 324
||||||||||||||||||||||||
Sbjct: 224 ataattcatataatcatgagagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
