Query= MSMg01no461_a19.b1 MSMg01no461_a19.b1 CHROMAT_FILE:
MSMg01no461_a19.b1 PHD_FILE: MSMg01no461_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:29 2005
(382 letters)
>mm_chr15_97614168_97614948
Length = 781
Score = 685 bits (354), Expect = 0.0
Identities = 375/382 (98%), Gaps = 2/382 (0%)
Strand = Plus / Plus
Query: 1 acgtggagacaccacgtctcaaaaaaaaaattcaaaagtattttaaaaattaacaagtgc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 202 acgtggagacaccacgtctcaaaaaaaaa-ttcaaaagtattttaaaaattaaaaagtgc 260
Query: 61 tcattggggctggagaggtggctcagcggataagagcactgactgctcttccaaaggtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattggggctggagaggtggctcagcggataagagcactgactgctcttccaaaggtcc 320
Query: 121 tgagttcaaacccagcaatcacatggtggctcacaaccatctgtaacgggatcggatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagttcaaacccagcaatcacatggtggctcacaaccatctgtaacgggatcggatgcc 380
Query: 181 ctcttctggtgtgtgtctgaagacagctacagtgtgctcacatatacaaaatatttttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcttctggtgtgtgtctgaagacagctacagtgtgctcacatatacaaaatatttttaa 440
Query: 241 atgatcattgttttctggctccggtaaagacggtatttctaggccagccaaggctagata 300
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgatcattgtagcc-ggctccggtaaagacggtatttctaggccagccaaggctagata 499
Query: 301 ggtggcgttctggggatgaggccaggaccctgcccttccaccaggggccgccggcctttg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 ggtggcgttctggggatgaggccaggaccctgcccttccaccaggggtcgccggcctttg 559
Query: 361 ccaagcggcggtgtcgggagcg 382
||||||||||||||||||||||
Sbjct: 560 ccaagcggcggtgtcgggagcg 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 781
Length adjustment: 9
Effective length of query: 373
Effective length of database: 772
Effective search space: 287956
Effective search space used: 287956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_a19.g1 MSMg01no461_a19.g1 CHROMAT_FILE:
MSMg01no461_a19.g1 PHD_FILE: MSMg01no461_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:30 2005
(528 letters)
>mm_chr15_97799434_97800357
Length = 924
Score = 843 bits (436), Expect = 0.0
Identities = 457/466 (98%), Gaps = 4/466 (0%)
Strand = Plus / Minus
Query: 1 accccacaatccacatagtgctgtgtctccaaggtgctctgggatatgtggccaatgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 accccacaatccacatagtgctgtgtctccaaggtgctctgggatatgtggccaatgtat 603
Query: 61 gaaatcttcacagaagtcctagcaaaaaaaaaccaaaacaatgaagagacttaaaaaaca 120
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 602 gaaatcttcacagaagtcctagcaaaaaa----caaaacaatgaagagacttaaaaaaca 547
Query: 121 ggaaatagtacccagcaaatgtcttacaagttgagggttccaggctcctatctttgtggt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ggaaatagtacccagaaaatgtcttacaagttgagggttccaggctcctatctttgtggt 487
Query: 181 tatgtagcctggaggccagaggacctttctggttattccaaaaaccttgtcatgaagtga 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tatgtaacctggaggccagaggacctttctggttattccaaaaaccttgtcatgaagtga 427
Query: 241 ccttctggactgttttttaagcagggatgatacgacacagaagcccacagaggggcttct 300
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccttctggactgtttcttaaacagggatgatacgacacagaagcccacagaggggcttct 367
Query: 301 ggcaccatctgggcacctttgggtcatcacaacagagtggaactgaggcgagagctccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggcaccatctgggcacctttgggtcatcacaacagagtggaactgaggcgagagctccca 307
Query: 361 gcagcaagcagagatgaggggagccactctgaagcatccacagtcactgacgacagagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcagcaagcagagatgaggggagccactctgaagcatccacagtcactgacgacagagaa 247
Query: 421 ctcactggcgacaaagctgagaatcctcactcaaatcccagatttc 466
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctcacaggcgacaaagctgagaatcctcactcaaatcccagatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 924
Length adjustment: 10
Effective length of query: 518
Effective length of database: 914
Effective search space: 473452
Effective search space used: 473452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
