Query= MSMg01no461_g17.b1 MSMg01no461_g17.b1 CHROMAT_FILE:
MSMg01no461_g17.b1 PHD_FILE: MSMg01no461_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:00 2005
(245 letters)
>mm_chr15_76501056_76501700
Length = 645
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 cctccccattgtaccatcaacaggacagagaccctggcaggtgccaaggaaggtacagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctccccattgtaccatcaacaggacagagaccctggcaggtgccaaggaaggtacagtc 260
Query: 61 atgagtggaggagggaatggggacacacaaggaggatgagcacagtgggacttcacttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagtggaggagggaatggggacacacaaggaggatgagcacagtgggacttcacttcc 320
Query: 121 tctgacagttctgcccctggctgggttgtgatcttatctcagattcttcttttagctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgacagttctgcccctggctgggttgtgatcttatctcagattcttcttttagctctc 380
Query: 181 atctgtctcccctccccacccccaatcctatcacctcctgcccctctgcttttcgtcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctgtctcccctccccacccccaatcctatcacctcctgcccctctgcttttcgtcctc 440
Query: 241 aga 243
|||
Sbjct: 441 aga 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_g17.g1 MSMg01no461_g17.g1 CHROMAT_FILE:
MSMg01no461_g17.g1 PHD_FILE: MSMg01no461_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:00 2005
(480 letters)
>mm_chr15_76680027_76680904
Length = 878
Score = 878 bits (454), Expect = 0.0
Identities = 472/482 (97%), Gaps = 8/482 (1%)
Strand = Plus / Minus
Query: 1 tcccctcaccttggttacgaccaaggaattcccctgatcaaaaagaaatatgatttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tcccctcaccttggttacgaccaaggaattcccctgatcaaaaagaaatatgatttcttc 618
Query: 61 ctccataggaactgtcattaaaggctctcatgaggtgtcagtgaaaaatagaccctttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctccataggaactgtcattaaaggctctcatgaggtgtcagtgaaaaatagaccctttga 558
Query: 121 ttcccttccccaaattgtcattaaaatgtatgaggcattccttctcaaagtgtcccacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttcccttccccaaattgtcattaaaatgtatgaggcattccttctcaaagtgtcccacct 498
Query: 181 ttccacatttgttttctcctgtccttatcatttctcctccattcctagtctgctgtaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttccacatttgttttctcctgtccttatcatttctcctccattcctagtctgctgtaagc 438
Query: 241 atccctg---tttttctccgctaccagaaaggtataaggaagacatcattgggatcctaa 297
||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atcccggggc-----ctccgctaccagaaaggtataaggaagacatcattgggatcctaa 383
Query: 298 gcctttgtcctgttctaggggcatttggttcacagagggagagaatgatcttagctttct 357
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcctttgtcctgttccaggggcatttggttcacagagggagagaatgatcttagctttct 323
Query: 358 gtttctgcttctcatgcctgcacgcatgctcttcctgggcctctacaagcaaatctttaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtttctgcttctcatgcctgcacgcatgctcttcctgggcctctacaagcaaatctttaa 263
Query: 418 gttctctacccttccaactttctaactttagtaactttttaaaaatgtctggccaactgt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gttctctacccttccaactttctaactttagtaactttttaaaaatgtctggccaactgt 203
Query: 478 tg 479
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 878
Length adjustment: 10
Effective length of query: 470
Effective length of database: 868
Effective search space: 407960
Effective search space used: 407960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
