Query= MSMg01no463_n02.b1 MSMg01no463_n02.b1 CHROMAT_FILE:
MSMg01no463_n02.b1 PHD_FILE: MSMg01no463_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:22 2005
(529 letters)
>mm_chr15_75657913_75658841
Length = 929
Score = 909 bits (470), Expect = 0.0
Identities = 509/522 (97%)
Strand = Plus / Minus
Query: 5 gaattccactgggttctccagggcagcaccccaaccagggctggctgaggaggacaagtc 64
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 726 gaattccactgggagctccagggcagcaccccagccagggctggctgaggaggacaagta 667
Query: 65 ggtctgtgggggataggaaatgactgctgagggttctgggccaggtagctgagtggggaa 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 666 ggtctgtgggggataggaaatgcctgctgagggttctgggccaggtagctgagtggggaa 607
Query: 125 cccacctccctcaatgggctggccttgtggagaggcaggtttggctgcacggggctagag 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 606 cccacctccctcaatgggctggccttgtggagaggcaggtttagctgcacggggctagag 547
Query: 185 atcaggctgccattgctgtttgacggatgcacagagaccctatttgacacctgtgctgga 244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atcaggctgccattgctgcttgacggatgcacagagaccctatttgacacctgtgctgga 487
Query: 245 gcccaacaatgaaatttagccagggtgtgtctgagcttgacatgagcagccagctggctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gcccaacaatgaaatttagccagggtgtgtctgagcttgacatgagcagccagctggctg 427
Query: 305 ggcaaggaggcctgggccttaggactgacagctgtgtctagggtccctaagaatatgctt 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 426 ggcaaggaggcctgcgccttaggactgacagctgtgtctagggtccctaagaatatgttt 367
Query: 365 tgctcaaaaagattgctccctaaaaaccctctaaaaccgttctttagccctttccttcgt 424
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 366 tgctcaaaaagattgctccctaaaaactctctaaaaccgttctttagccctttccttcat 307
Query: 425 gcctgggcattcctaatttttaagggaaacacatgcctgggtggagttcatctggtttag 484
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gccttggcattcctaatttttaagggaaacacatgcctgggtggagttcatctggtttag 247
Query: 485 ttcaggatggtctcctatacccataatttgatctgggcatca 526
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 246 ttcaggatggtctcctatacccataatttgatccgggcatca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_n02.g1 MSMg01no463_n02.g1 CHROMAT_FILE:
MSMg01no463_n02.g1 PHD_FILE: MSMg01no463_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:22 2005
(275 letters)
>mm_chr15_75453377_75454051
Length = 675
Score = 458 bits (237), Expect = e-133
Identities = 268/287 (93%), Gaps = 14/287 (4%)
Strand = Plus / Plus
Query: 1 aacaaagtctgcatggaaaacagtgaaagaaaattttttttcaattgcagttcatgagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaaagtctgcatggaaaacagtgaaagaaaattttttttcaattgcagttcatgagta 260
Query: 61 tgggaaaagtcatgcaaccaaaccagcaggaggaggtcatgggacatgcccaacaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaaaagtcatgcaaccaaaccagcaggaggaggtcatgggacatgcccaacaggaag 320
Query: 121 aggagcatgtcagactgctgcttgtgttgtcctctaagtgtgtgtgtgtgtgtgtgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagcatgtcagactgctgcttgtgttgtcctctaagtgtgtgtgtgtgtgtgtgtgtg 380
Query: 181 tgtgtgtgtgtg--------------cacatgcacacgtgcgcctgactctaggtctcag 226
|||||||||||| ||| |||||||||||||||||| |||||||||||
Sbjct: 381 tgtgtgtgtgtgtgtgtgtgtgtgtgcacgtgcacacgtgcgcctgacactaggtctcag 440
Query: 227 tccacagctggagccccacatctttttgtaccctcgattttctttgg 273
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 cccacagctggagccccacatccctttgtaccctcgattttctttgg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
