Query= MSMg01no468_k10.b1 MSMg01no468_k10.b1 CHROMAT_FILE:
MSMg01no468_k10.b1 PHD_FILE: MSMg01no468_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:57 2005
(215 letters)
>mm_chr15_97995820_97996434
Length = 615
Score = 377 bits (195), Expect = e-109
Identities = 210/215 (97%)
Strand = Plus / Minus
Query: 1 gctccctgccttctacccttgaagaccgatcctgttctcagtgtaacgcttcccacgttt 60
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 415 gctccctgccttctacccttgaagaccgatcctgttctcagtgaaatgcttcccacgttt 356
Query: 61 gctgccaagataggcttacgtcagacctagccctgctcagtaggagctgggttatgccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gctgccaagataggcttacgtcagacctagccctgctcagtaggagctgggttatgccat 296
Query: 121 cacacaaggcccttggccactattgctgcaggtactgtgtgtcagggctttcagcatctt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 295 cacacaaggcccttggccactattgttgcaggtactgtgtgtcagggctttcagcatcag 236
Query: 181 aatatcatgtcgctcagaggctctgaccatgcagc 215
|||||||||||||||||||||||||||||||||||
Sbjct: 235 aatatcatgtcgctcagaggctctgaccatgcagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_k10.g1 MSMg01no468_k10.g1 CHROMAT_FILE:
MSMg01no468_k10.g1 PHD_FILE: MSMg01no468_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:57 2005
(229 letters)
>mm_chr15_97826406_97827035
Length = 630
Score = 383 bits (198), Expect = e-111
Identities = 222/230 (96%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 1 agacctggttggaagggaaacacaactcgaggcggtcgctttggaagctagctactctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 agacctggttggaagggaaacacaactcgaggcggtcgctttggaagctagttactctac 260
Query: 61 aaggaagagagacaaaaaggtagtaacaaaactgtaaaggagatcatggtgggaggaggg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 aaggaagagagacaaaaaggtagtaacaaaactgtaaagcagatcatggtgggaggaggg 320
Query: 121 gactgcgcaggctggtgacccctaaggggaagtgtcccgatggagttcctgccatattga 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactgcgcaggctggcgacccctaaggggaagtgtcccgatggagttcctgccatattga 380
Query: 181 ttctcttttgttgtgccccatgggta-ggcactcccattgtgggaaaggg 229
|||||| |||||||||| |||||| |||||||||||||||||||||||
Sbjct: 381 ttctctgccgttgtgccccgtgggtaaggcactcccattgtgggaaaggg 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
