Query= MSMg01no470_b21.b1 MSMg01no470_b21.b1 CHROMAT_FILE:
MSMg01no470_b21.b1 PHD_FILE: MSMg01no470_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:55 2005
(285 letters)
>mm_chr15_87297753_87298430
Length = 678
Score = 458 bits (237), Expect = e-133
Identities = 267/287 (93%), Gaps = 19/287 (6%)
Strand = Plus / Plus
Query: 1 ttttgaactaaatgatttgttaaacagccagatagatagatagatagatagatagataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttttgaactaaatgatttgttaaacagccagatagatagatagatagatagatagataga 268
Query: 61 tagatagatagatagatagatagatagagatattgatatattgcatttgaaaaaccattt 120
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 269 tagatagatagatagataga--------gatattgatatattgcatttgaaaaaccattt 320
Query: 121 ccttgtgtcccttaaagtgaaaatatactttgagactagagctggaaccttcccagcctg 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 ccttgtgtcccttaaagtgaaaatatactttgagactagagc------cttcccagcctg 374
Query: 181 cctctgtgcatctcctactctggcaggcttggagcctgtttggtacaactagttgctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cctctgtgcatctcctactctggcaggcttggagcctgtttggtacaactagttgctgaa 434
Query: 241 ctgatta--ttttgtgaatcccaagctgatagctactcctcacttag 285
||||||| | ||||||||||||||||||||||||| ||||||||
Sbjct: 435 ctgattaggt---gtgaatcccaagctgatagctactcatcacttag 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 678
Length adjustment: 9
Effective length of query: 276
Effective length of database: 669
Effective search space: 184644
Effective search space used: 184644
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_b21.g1 MSMg01no470_b21.g1 CHROMAT_FILE:
MSMg01no470_b21.g1 PHD_FILE: MSMg01no470_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:55 2005
(247 letters)
>mm_chr15_87450249_87450895
Length = 647
Score = 447 bits (231), Expect = e-130
Identities = 243/247 (98%)
Strand = Plus / Minus
Query: 1 agctagctaaaacatcaagttcctaaacttccgtcattaaagatacatgtgcacagggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agctagctaaaacatcaagttcctaaacttccgtcattaaagatacatgtgcacagggct 388
Query: 61 gccaggggatggcttggtgggtaacagcgcttgctctacaagcattccgcagcaagtatg 120
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gccgggggacggcttggtgggtaacagcgcttgctctacaagcattccgcagcaagtatg 328
Query: 121 aaagcaaggaaaggtagagtctgagagcttcctgttcactgagaaaccctttctcaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaagcaaggaaaggtagagtctgagagcttcctgttcactgagaaaccctttctcaaggc 268
Query: 181 aataagatagagagtgagggagggaggaggacacttgctctggacttgccatgcacacat 240
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 267 aataagatagagagtgagggagggaggaggacacttgctctggccttggcatgcacacat 208
Query: 241 atgagca 247
|||||||
Sbjct: 207 atgagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
