Query= MSMg01no471_e15.b1 MSMg01no471_e15.b1 CHROMAT_FILE:
MSMg01no471_e15.b1 PHD_FILE: MSMg01no471_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:29 2005
(623 letters)
>mm_chr15_27810884_27811907
Length = 1024
Score = 1106 bits (572), Expect = 0.0
Identities = 604/616 (98%), Gaps = 5/616 (0%)
Strand = Plus / Minus
Query: 11 ttcaaaagttttc--gtaccagtgagctgtgccactaagttccggccgtgaggacagaac 68
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ttcaaaag--ttcaggtaccagtgagctgtgccactaagttccggccgtgaggacagaac 767
Query: 69 accagcttgcccgctgattcagtgcatgggatgtgtggctgttataatagctcacagttt 128
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 accagcttgcccgctgattgagtgcatgggatgtgtggctgttataatagctcacagttt 707
Query: 129 ataggatacattgtttgaatcacctgagttatgaagctttgttgatgggcccagcagagt 188
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ataggatacgttgtttgaatcacctgagttatgaagctttgttgatgggcccagcagagt 647
Query: 189 gtcgtgtctaccctcttacccaaaatccagtcagtttggaggctttctcatgcctcagat 248
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gtcgtgtctaccctcttacacaaaatccagtcagtttggaggctttctcatgcctcagat 587
Query: 249 aaggtgaaatttaatttaatcaccattttatgcagtgtttatacttagaacaatttgctc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aaggtgaaatttaatttaatcaccattttatgcagtgtttatacttagaacaatttgctc 527
Query: 309 ctttaatataaaagttggttacagtcccagtggagaaccagatgtaagatgtaattacaa 368
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 526 ctttaatataaaagttggttacagtcccggtggagaaccagatgtaagatataattacaa 467
Query: 369 agtgaatcaaatcagtatccaggcatctcttcctagtaatgtattttgttttgcttcatg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agtgaatcaaatcagtatccaggcatctcttcctagtaatgtattttgttttgcttcatg 407
Query: 429 tttgccgcagaatttt-gaaaaggaacgaaccttttctagattggcctaagcaatgagca 487
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttgccgcagaatttttgaaaaggaacgaaccttttctagattggcctaagcaatgagca 347
Query: 488 aggtgggcgccgtgtttatggcccgtgtggctgttttctttgcaggtgctggactggata 547
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aggtgggcgctgtgtttatggcccgtgtggctgttttctttgcaggtgctggactggata 287
Query: 548 gagaaccacggagaagcatttctgagcaaacacacgggcgtgggcaaatcccttcaccgg 607
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gagaaccacggagaagcgtttctgagcaaacacacgggcgtgggcaaatcccttcaccgg 227
Query: 608 gccagagctttgcaga 623
||||||||||||||||
Sbjct: 226 gccagagctttgcaga 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1024
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1014
Effective search space: 621582
Effective search space used: 621582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_e15.g1 MSMg01no471_e15.g1 CHROMAT_FILE:
MSMg01no471_e15.g1 PHD_FILE: MSMg01no471_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:30 2005
(561 letters)
>mm_chr15_27639542_27640502
Length = 961
Score = 1054 bits (545), Expect = 0.0
Identities = 557/561 (99%)
Strand = Plus / Plus
Query: 1 ccaggacgttaacatacggggaggttggggcagaggaggtggctgagttagaaaagtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaggacgttaacatacggggaggttggggcagaggaggtggctgagttagaaaagtggc 260
Query: 61 attgctgtgcaaatgtcagaacccgggttagagccccagtgcccatgtaaaagcggggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgctgtgcaaatgtcagaacccgggttagagccccagtgcccatgtaaaagcggggca 320
Query: 121 cactggcatatgcctgcatccctagtgccaggactgaagacaacaggcagatctctggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactggcatatgcctgcatccctagtgccaggactgaagacaacaggcagatctctggag 380
Query: 181 ttggttcaccagcctaacggacatcagtgagctctaggttcagggagaaaccctggtccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ttggttcaccagcctaacggacatcagtgagctctaggttcagggagaaaccctgctccc 440
Query: 241 caaaataagatgggcaatctagaagaaaacactcgcacacttcaagggtaaaaaaacaga 300
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 caaaataagatgggcgatctagaagaaaacactcgcacacttcaagggtaacaaaacaga 500
Query: 301 aatgtcccaggcaaacaggaatggaaaggttaccttgatatgaagcccaacgagatgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgtcccaggcaaacaggaatggaaaggttaccttgatatgaagcccaacgagatgtca 560
Query: 361 catgcccatttgctcttatctaccctgtccctcccacctgttgacactaacaagaagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgcccatttgctcttatctaccctgtccctcccacctgttgacactaacaagaagact 620
Query: 421 gaggttgcccccacccctactcccaaccctctggtggtgttgtgaacagaaccctgagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaggttgcccccacccctactcccaaccctctggtggtgttgtgaacagaaccctgagct 680
Query: 481 ccatgcatgctaggtgtggccctaccacagaatgactgcttcagccctggttctccacag 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 ccatgcatgctaggtgtggccctaccacagaatgactgcttcagccctggttctccacgg 740
Query: 541 acatcccagtctctctgtttc 561
|||||||||||||||||||||
Sbjct: 741 acatcccagtctctctgtttc 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
