Query= MSMg01no471_n19.b1 MSMg01no471_n19.b1 CHROMAT_FILE:
MSMg01no471_n19.b1 PHD_FILE: MSMg01no471_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:16 2005
(391 letters)
>mm_chr15_99485915_99486704
Length = 790
Score = 690 bits (357), Expect = 0.0
Identities = 378/391 (96%), Gaps = 11/391 (2%)
Strand = Plus / Plus
Query: 1 tagatccaccgacctctgcctcccatgtgctaggattaaaggtgtgcaacaccacaccca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagatccaccaacctctgcctcccatgtgctaggattaaaggtgtgcaacaccacaccca 260
Query: 61 gctcacccacctgctaactctctctacccctttatcagggcttcagatatcatctttatc 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gctcacccacctgctaactctctctacccc-ttatcagggcttcagatatcatctttatc 319
Query: 121 acccaggttatcctctcccaaaaactatcccatcctcccacacatctgaccctcatagaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acccaggttatcctctctcaaaaactatcccatcctcccacacatctgaccctcatagaa 379
Query: 181 tacctcactgtgttttgccagctaagggcttctcagcacagacagagacagccaaaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacctcactgtgttttgccagctaagggcttctcagcacagacagagacagccaaaggag 439
Query: 241 caacaatacacatatttggatttggccaggcttctctgggcagcggaggacagaggcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caacaatacacatatttggatttggccaggcttctctgggcagcggaggacagaggcaca 499
Query: 301 gacaggaaggcaggaaaaccatcccttacacacacacacacacacacacacacacacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacaggaaggcaggaaaaccatcccttacacacacacacacacacacacacacacacaca 559
Query: 361 cacacacacacactcactcggtgctctgcgg 391
||| ||||||||||||||||||
Sbjct: 560 cac----------tcactcggtgctctgcgg 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 790
Length adjustment: 9
Effective length of query: 382
Effective length of database: 781
Effective search space: 298342
Effective search space used: 298342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_n19.g1 MSMg01no471_n19.g1 CHROMAT_FILE:
MSMg01no471_n19.g1 PHD_FILE: MSMg01no471_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:16 2005
(548 letters)
>mm_chr15_99639336_99640283
Length = 948
Score = 872 bits (451), Expect = 0.0
Identities = 454/455 (99%)
Strand = Plus / Minus
Query: 1 agaaggtccagctgcagaacaagccccaaggatatttggggctctgaatttgatctttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agaaggtccagctgcagaacaagccccaaggatatttggggctctgaatttgatctttaa 396
Query: 61 gctaaaggaaataggaagcaggaatggggcaaggggcggggatgtgtctcttacctccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gctaaaggaaataggaagcaggaatggggcaaggggcggggatgtgtctcttacctccga 336
Query: 121 cacactggctttcagtaattcccagatatttgaatggcagaatctggctgaaggccatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cacactggctttcagtaattcccagatatttgaatggcagaatctggctgaaggccatca 276
Query: 181 taacagaaggtgatgttccacgtctgtgtttgaaatactctatgaacctaagtgtcttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taacagaaggtgatgttccacgtctgtgtttgaaatactctatgaacctaagtgtcttga 216
Query: 241 gtatatttctagtcctaaaattataatttaaaactttatttatatgtttttttttttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gtatatttctagtcctaaaattataatttaaaactttatttatatgtttttttttttttt 156
Query: 301 gagactttgagacagggtttctctgtatagccctggctgtcctggaactccctttgtaga 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 155 gagactttgagacagggtttctctgtatagccctggctgtcctggaactcactttgtaga 96
Query: 361 ccaggctgtcctcgaactcagaaatccgcctgcctctgcctcccaggtgctgggattaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ccaggctgtcctcgaactcagaaatccgcctgcctctgcctcccaggtgctgggattaaa 36
Query: 421 ggtgtgcaccaccaccgcctggcatgttttgtttt 455
|||||||||||||||||||||||||||||||||||
Sbjct: 35 ggtgtgcaccaccaccgcctggcatgttttgtttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
