Query= MSMg01no472_d22.b1 MSMg01no472_d22.b1 CHROMAT_FILE:
MSMg01no472_d22.b1 PHD_FILE: MSMg01no472_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:49 2005
(539 letters)
>mm_chr15_15741502_15742443
Length = 942
Score = 569 bits (294), Expect = e-166
Identities = 302/306 (98%), Gaps = 3/306 (0%)
Strand = Plus / Minus
Query: 236 gctcattagagtcagtgaaaggaaagactacaaagggtggtcagtagaaatgtactaact 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 gctcattagagtcagtgaaaggaaagactacaaagggtggtcagtagaaatgtactaact 883
Query: 296 acacctgctggatggcagctgtcaaactgaggattccattctaccatccaggagactgag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 acacctgctggatggcagctgtcaaactgaggattccattctaccatccaggagactgag 823
Query: 356 aacctattcttggtgatgataaagtttagaagaatggctttaagttcttgggatatatat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 aacctattcttggtgatgataaagtttagaagaatggctttaagttcttgggatatatat 763
Query: 416 acttctgagttttaagaaatattttttaatgatgacaaacttttcatatgtaaatcttct 475
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 762 acttctgagttttaagaaatattttttaatgacgacaaacttttcatatgtaaatcttct 703
Query: 476 ---aaaaaatgaggagtaaggagtctatcatgggactttgtctacagcaaagtgtaaggt 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaaaaaaaatgaggagtaaggagtctatcatgggactttgtctacagcaaagtgtaaggt 643
Query: 533 cccctg 538
||||||
Sbjct: 642 cccctg 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 942
Length adjustment: 10
Effective length of query: 529
Effective length of database: 932
Effective search space: 493028
Effective search space used: 493028
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_d22.g1 MSMg01no472_d22.g1 CHROMAT_FILE:
MSMg01no472_d22.g1 PHD_FILE: MSMg01no472_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:49 2005
(503 letters)
>mm_chr15_15569585_15570488
Length = 904
Score = 727 bits (376), Expect = 0.0
Identities = 418/432 (96%), Gaps = 3/432 (0%)
Strand = Plus / Plus
Query: 4 gaattatagaattttcatttagatattcaggattagtattttgtcatttgagtaggcaca 63
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattatagacttttcatttagatattcaggattagtattttgtcatttgagtaggcaca 263
Query: 64 ataccaatagatttagaaagactataaaatatggggaaaattaaagtgaagaaagtcaaa 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 ataccaatagatttagaaagactataaaatatggggaaaatttaagtgaagaaagtcaaa 323
Query: 124 gagaaattgttaataaatataccacattaggaatggcattttaaaggtatcttacattac 183
|||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 324 gagaaatttttaataaatgtaccacattaggaatgtcattttaaaggtatcttacattaa 383
Query: 184 aaacttccaactataacagttttaaagtactcatatgatattcatatataatttttatta 243
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 384 aaacttccaactataacatttttaaagtgctcatatgatattcatatataatttttatta 443
Query: 244 gcagatcta-ttttttttaa-tttccacaaataccttgctatttttttagaactacaatt 301
||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 gcagagctaattttttttaaatttccacaaataccttgctatttttt-agaactacaatt 502
Query: 302 aattccatggacaacataatgctgcgtaatatttgacttctgtagctatttttatgctta 361
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 503 aattccatggacaacataatgctgcataatatttgacttctgtagctatttttatgttta 562
Query: 362 tagatatgaactgtgataccaagcagaattatacaaaacaaataatatttgattcaatat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tagatatgaactgtgataccaagcagaattatacaaaacaaataatatttgattcaatat 622
Query: 422 attccagatttt 433
||||||||||||
Sbjct: 623 attccagatttt 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 904
Length adjustment: 10
Effective length of query: 493
Effective length of database: 894
Effective search space: 440742
Effective search space used: 440742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
