Query= MSMg01no472_f08.b1 MSMg01no472_f08.b1 CHROMAT_FILE:
MSMg01no472_f08.b1 PHD_FILE: MSMg01no472_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:56 2005
(551 letters)
>mm_chr15_59968535_59969491
Length = 957
Score = 980 bits (507), Expect = 0.0
Identities = 539/553 (97%), Gaps = 6/553 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcatatacttgagattggttttaatattttttgcatctaattttggcttctaa 64
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcacataattgagattggttttaatattttttgcatctaattttggcttctaa 264
Query: 65 ctagagcatacaagacaagacattcagaaataatacttagagatacatactataattaca 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 265 ctagagcatacaagacaagacattcagaaataatacttagagttacatactataattaca 324
Query: 125 aggcaaagtcttcccccaaagaagtaattaattacaaataaaatggcttgggtttcctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggcaaagtcttcccccaaagaagtaattaattacaaataaaatggcttgggtttcctcc 384
Query: 185 tttttctctaagctcagacaagctgctctaacctgtccaagcacttcaatgagagagctt 244
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 385 tttttctctaagctcagacaagcggctctaacctgtccaagcacttcagtgagagagctt 444
Query: 245 cagagacaaagagcagtgttcttcagacaatgcagtctgtatttagcagacagggtcatt 304
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 cagagacaaagggcagtgttcttcagagaatgcagtctgtatttagcagacagggtcatt 504
Query: 305 tctggcatcagaacagtgtccagtgtaagctga------tttttttttttacatgaggaa 358
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 tctggcatcagaacagtgtccagtgtaagctgagttttttttttttttttacatgaggaa 564
Query: 359 tggaaatgttgtctctgctctctccacagctacctagtatctctagacacagagaagttg 418
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggaaatgttgtctctgccctctccacagctacctagtatctctagacacagagaagttg 624
Query: 419 tcagtctcaaggtctgagtaatgccagaaaaagaacaagatctctctgtgtgggaaaaag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcagtctcaaggtctgagtaatgccagaaaaagaacaagatctctctgtgtgggaaaaag 684
Query: 479 ttatggccttcatttgcaagtaatttgtaatgaattctctgaaaatatatgcttttaagg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttatggccttcatttgcaagtaatttgtaatgaattctctgaaaatatatgcttttaagg 744
Query: 539 cttttagctgatt 551
|||||||||||||
Sbjct: 745 cttttagctgatt 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 957
Length adjustment: 10
Effective length of query: 541
Effective length of database: 947
Effective search space: 512327
Effective search space used: 512327
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_f08.g1 MSMg01no472_f08.g1 CHROMAT_FILE:
MSMg01no472_f08.g1 PHD_FILE: MSMg01no472_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:56 2005
(575 letters)
>mm_chr15_60149144_60150118
Length = 975
Score = 810 bits (419), Expect = 0.0
Identities = 425/427 (99%)
Strand = Plus / Minus
Query: 149 taaaacaaactttatcacaatgtagttcacagtaagttattgtgtatttatgaaaatcta 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 taaaacaaactttatcacaatgtagttcacagtaagttattgtgtatttatgaaaatcta 916
Query: 209 gtaaagagaagcttgaaggctccaaacacaaaaataataaggaaatgctaattgccctaa 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 gtaaagagaagcttgaaggctccaaacacaaaaataataaggaaatgctaattgccctaa 856
Query: 269 tttgcccagtgcatgctttctggtgtgttattaataaaatatcacactgactctcattca 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tttgcccagtgcatgctttctggtgtgttattaataaaatatcacactgactctcattca 796
Query: 329 tttgtacatgctaattaaaatctaaaataaaaacaatatatcctcaggcctaatgaaacc 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tttgtacatgctaattaaaatctaaaataaaaacaatatatcctcaggcctaatgaaacc 736
Query: 389 tggaatgatgcagagactgaagtgagtattgggcttcagagtcaaactaatggggattta 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tggaatgatgcagagactgaagtgagtattgggcttcagagtcaaactaatggggattta 676
Query: 449 agacctaagggaacgctaaattatgttaccttggtcaaataatataagtcatacagaaat 508
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 675 agacctaagggaacgctaaattatgttaccttggtcaagtaatataagtcatacagaaat 616
Query: 509 cactgtcctatcatgaaaaatggaaaaagtagctgccatgtattaacatgaagataagca 568
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cactgccctatcatgaaaaatggaaaaagtagctgccatgtattaacatgaagataagca 556
Query: 569 ataagtt 575
|||||||
Sbjct: 555 ataagtt 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
