Query= MSMg01no473_n07.b1 MSMg01no473_n07.b1 CHROMAT_FILE:
MSMg01no473_n07.b1 PHD_FILE: MSMg01no473_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:04 2005
(245 letters)
>mm_chr15_98880366_98881007
Length = 642
Score = 435 bits (225), Expect = e-126
Identities = 239/245 (97%), Gaps = 3/245 (1%)
Strand = Plus / Minus
Query: 1 agctccatctcccccgttggggggggggggtatcctgactcaccttcacctcactgggtc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agctccatctcccccgtt---gggggggggtatcctgactcaccttcacctcactgggtc 386
Query: 61 tcagagcgctttattagaactaatatttggtatttttcaagcactgtggcaagcacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 tcagagcgctttattagaactaatatttggtatttttcaagcactgtggtaagcacttga 326
Query: 121 cacattcagtcatttcccagtatcaggatattctacccagattgctgctgctcttgctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacattcagtcatttcccagtatcaggatattctacccagattgctgctgctcttgctct 266
Query: 181 ctgtttacaaaataagatgggaggggggcagggtgctgctgaggagatggcttggcagtg 240
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagtttacaaaataagataggaggggggcagggtgctgctgaggagatggcttggcagtg 206
Query: 241 aagag 245
|||||
Sbjct: 205 aagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 642
Length adjustment: 9
Effective length of query: 236
Effective length of database: 633
Effective search space: 149388
Effective search space used: 149388
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no473_n07.g1 MSMg01no473_n07.g1 CHROMAT_FILE:
MSMg01no473_n07.g1 PHD_FILE: MSMg01no473_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:04 2005
(503 letters)
>mm_chr15_98708479_98709381
Length = 903
Score = 903 bits (467), Expect = 0.0
Identities = 494/503 (98%)
Strand = Plus / Plus
Query: 1 tccacccgggcaatctcctggatgactttgatgaagacatcttgagttagctataaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacccgggcaatctcctggatgactttgatgaagacatcttgagttagctataaggaa 260
Query: 61 taagatcagcggtcaatcagttgggtcagagccgatactatccagccccaaggcaaacag 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagatcagcagtcaatcagttgggtcagagccgatactatccagccccaaggcaaacag 320
Query: 121 cgcttcctaactatccccaccaccaaagagcatgtaggaagacacggttagccttgcccc 180
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 321 cgcttcctaactatccccaccaccaatcagcatgtaggaaaacacggttagccttgcccc 380
Query: 181 tgggtccaatctttaagttcagcacctgattatcccgagcagacgactccataaacattg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tgggtccaatctttaagttcagcacctgattatcccgagcagacgactccataaacatcg 440
Query: 241 caccccaggactctgctagcttcttcccttcaactgcctgcacctctctggaagcagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caccccaggactctgctagcttcttcccttcaactgcctgcacctctctggaagcagatt 500
Query: 301 tggaacacaccaaggtggaaagcagatagcaacgttggcaagttctctgaaaaatctcta 360
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 tggaacacaccaagatggaaagcagatagcaacgtcggcaagttctctgaaaaatctcta 560
Query: 361 gggtttagattccttctgatgattcacaacccctcccccaaggtttgaggaggtgaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtttagattccttctgatgattcacaacccctcccccaaggtttgaggaggtgaagaa 620
Query: 421 agagaaaatatacgtaaacaaaagcatgatatgtaaatggagaactgaaatataaattat 480
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 621 agagaaaatatacgtaaacaaaagcatgatatgtaaatgcaaaactgaaatataaattat 680
Query: 481 gataggattatccttaagtgacc 503
|||||||||||||||||||||||
Sbjct: 681 gataggattatccttaagtgacc 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
