Query= MSMg01no475_a20.b1 MSMg01no475_a20.b1 CHROMAT_FILE:
MSMg01no475_a20.b1 PHD_FILE: MSMg01no475_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:42 2005
(296 letters)
>mm_chr15_77994127_77994822
Length = 696
Score = 511 bits (264), Expect = e-149
Identities = 286/296 (96%), Gaps = 6/296 (2%)
Strand = Plus / Minus
Query: 4 ggaattctttga---attttccgtggtgagttcccccaaccctctgagccactgggatgg 60
|||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaattctttgagaca---tctgtggtgagttcccccaaccctctgagccactgggatgg 459
Query: 61 gggccccagtgctagaggtttgatcgtgacctgggacgcatcaagtggttctgccaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gggccccagtgctagaggtttgatcgtgacctgggacgcatcaagtggttctgccaccag 399
Query: 121 atgcaaaatctaaattagaaccgatgctcacattctgcccagggactctgctcagtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atgcaaaatctaaattagaaccgatgctcacattctgcccagggactctgctcagtgtgt 339
Query: 181 gtcaggagagtcttctgtatggcacactgtgaagcagggcagacagcctaccctgggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtcaggagagtcttctgtatggcacactgtgaagcagggcagacagcctaccctgggcag 279
Query: 241 agccgtgtgcatctctcttggaaagactttgaagtatgtttagagggagggggttg 296
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 278 agccgtgtgcatctctcttggaaagactttgaagtatggggagagggagggggttg 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_a20.g1 MSMg01no475_a20.g1 CHROMAT_FILE:
MSMg01no475_a20.g1 PHD_FILE: MSMg01no475_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:42 2005
(293 letters)
>mm_chr15_77821851_77822543
Length = 693
Score = 567 bits (293), Expect = e-166
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 1 atgactttggatgttgggacaccttactgcctatggtttaaggccatcatccctcaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgactttggatgttgggacaccttactgcctatggtttaaggccatcatccctcaactc 260
Query: 61 tgagaacttctttagatgggatgacccgagctgggacagcggttcaaggaattcatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagaacttctttagatgggatgacccgagctgggacagcggttcaaggaattcatggaa 320
Query: 121 gtgaggaccaagctataaaaaaaaatctttatttcatgtaccaggattttgttttcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaggaccaagctataaaaaaaaatctttatttcatgtaccaggattttgttttcttgt 380
Query: 181 tgtttcgtttgtttttaggtttcttctttttaaaatttttttttctgttaacagtctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttcgtttgtttttaggtttcttctttttaaaatttttttttctgttaacagtctgga 440
Query: 241 aaaaaataagaacccaccaagaaaataaaatggaagttggtgtttttttgttt 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaataagaacccaccaagaaaataaaatggaagttggtgtttttttgttt 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
