Query= MSMg01no476_c15.b1 MSMg01no476_c15.b1 CHROMAT_FILE:
MSMg01no476_c15.b1 PHD_FILE: MSMg01no476_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:11 2005
(215 letters)
>mm_chr15_31027566_31028180
Length = 615
Score = 393 bits (203), Expect = e-114
Identities = 212/215 (98%)
Strand = Plus / Minus
Query: 1 ccacggctgtacaaaatcctgccccctttgtctcagtgctgtttacctttcttccacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ccacggctgtacaaaatcctgccccctttgtctcagtgctgtttacctttcttccacctt 356
Query: 61 ccctgggacaaccagcaacaggaagcaccctggtcatcttgacatggttttcttttcatt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccctgggacgtccagcaacaggaagcaccctggtcatcttgacatggttttcttttcatc 296
Query: 121 aatcagtcctcagactagatattcaactccctgcaagcaacaccaggtaacagacttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aatcagtcctcagactagatattcaactccctgcaagcaacaccaggtaacagacttcct 236
Query: 181 tacgcgcctaacagaatgtagctttaacagtaaat 215
|||||||||||||||||||||||||||||||||||
Sbjct: 235 tacgcgcctaacagaatgtagctttaacagtaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_c15.g1 MSMg01no476_c15.g1 CHROMAT_FILE:
MSMg01no476_c15.g1 PHD_FILE: MSMg01no476_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:11 2005
(240 letters)
>mm_chr15_30827033_30827671
Length = 639
Score = 412 bits (213), Expect = e-119
Identities = 231/237 (97%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 4 ttttttcttttattgaaaatagatgtttttcacatagtgtgtttagactcagtgcatagc 63
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 tttttt-ttttattgaaaatagatgtttttcacatagtgtgttcagactcagtgcatagc 262
Query: 64 tgcggcttggctgggatattttacccgcccactttctctccccgctgtgggattccggga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgcggcttggctgggatattttacccgcccactttctctccccgctgtgggattccggga 322
Query: 124 gcccagtgctgagcctgcctacctgctacactgttttcttatatcccagttcatttgttt 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 323 gcccagtgctgagcctgcctacctgctacactgttttcttttatcccagttcatttgttt 382
Query: 184 gcttatgttttatctcatttggccttattaatattccttgcatgactgttcattttc 240
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 383 atttatgttttatctcatttggtcttattaatattccttgcatgactgttcattttc 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
