Query= MSMg01no477_b06.b1 MSMg01no477_b06.b1 CHROMAT_FILE:
MSMg01no477_b06.b1 PHD_FILE: MSMg01no477_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:24 2005
(597 letters)
>mm_chr15_100787482_100788478
Length = 997
Score = 1035 bits (535), Expect = 0.0
Identities = 580/617 (94%), Gaps = 35/617 (5%)
Strand = Plus / Plus
Query: 5 gaattctagaaagtcagtctaccctgcccctcagccgcagaggctttgccatcctgggtg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagaaagccagtctaccctgcccctcagccgcagaggctttgccatcctgggtg 264
Query: 65 ccccttccccaaggctgagatagctttgagagcctccttgcctgtttcagagtcatcccg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccccttccccaaggctgagatagctttgagagcctccttgcctgtttcagagtcatcccg 324
Query: 125 gttatattctttagagccctgagcaggcctagtgcagcattccagttcccaccaggagta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttatattctttagagccctgagcaggcctagtgcagcattccagttcccaccaggagta 384
Query: 185 acctcagctgtccgcatccctgacaggtacacattcacagggatttacacatttgaatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acctcagctgtccgcatccctgacaggtacacattcacagggatttacacatttgaatca 444
Query: 245 ctagtgaaaatcatcgccagaggtttctgcatagacggcttcaccttcttacgagacccg 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctggtgaaaatcatcgccagaggtttctgcatagacggcttcaccttcttacgagacccg 504
Query: 305 tggaactggttagacttcagtgtcatcatgatggcgtgagttccttgtttattttactgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggaactggttagacttcagtgtcatcatgatggcgtgagttccttgtttattttactgt 564
Query: 365 ttcctctgtgtgtgtg------------------------gtgtgtgtgtgtgtgtgtgt 400
|||||||||||||||| ||||||||||||||||||||
Sbjct: 565 ttcctctgtgtgtgtgtggtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 624
Query: 401 gtggtgtgtcctgaataggcttgcaagatggtgcaagtaaatgtgagttttgggctcagc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtggtgtgtcctgaataggcttgcaagatggtgcaagtaaatgtgagttttgggctcagc 684
Query: 461 agaatagagaccctttcttgtttttctttttcttttctttcttcttcttcttcttcttct 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agaatagagaccctttcttgtttttctttttcttttctttcttcttcttcttcttctt-- 742
Query: 521 tcttttttttttttttttttttttggagatagggtctcttggagcccaggttgtccttga 580
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ---------tttttttttttttttggagatagggtctcttggagcccaggttgtccttga 793
Query: 581 actcaccatatagccta 597
|||||||||||||||||
Sbjct: 794 actcaccatatagccta 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_b06.g1 MSMg01no477_b06.g1 CHROMAT_FILE:
MSMg01no477_b06.g1 PHD_FILE: MSMg01no477_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:24 2005
(614 letters)
>mm_chr15_100942748_100943761
Length = 1014
Score = 1004 bits (519), Expect = 0.0
Identities = 586/617 (94%), Gaps = 20/617 (3%)
Strand = Plus / Minus
Query: 1 tcttattgttccttagtcacaagatggctgctctaccccaagccatcagagtcaaatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tcttattgttccttagtcacaagatggctgctctaccccaagccatcagagtcaaatgtg 765
Query: 61 gaattctatgcagtaggtagaaaatatctatgacgttataggccagacatctctgatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gaattctatgcagtaggtagaaaatatctatgacgttataggccagacatctctgatcat 705
Query: 121 ttacagacaccctatctacagcttcctttttctctagtcatcttagagctagctgctgta 180
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 704 ttacagacaccctatctacagctttctttttctctagtcaccttagagctagctgctgta 645
Query: 181 tggaatcccagtggatgagcacaggtgtgtgcacacaggtgcatgtgcacaggtggatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tggaatcccagtggatgagcacaggtgtgtgcacacaggtgcatgtgcacaggtggatgc 585
Query: 241 actcaggtgtgtgtacacaggtgaat-gagcacag--atggatgcacacaggtgggtgca 297
|| |||||| ||| ||||||||| || || || || ||| |||||||||||| |||||
Sbjct: 584 acacaggtgggtgcacacaggtggataga-cataggcatg--tgcacacaggtgtgtgca 528
Query: 298 cacaggtggatagacataggcatgtgcacacaggtgtgtgcacacaagtgaatgcacaca 357
|||| || || | ||||||||||||||||||||||||||||||||||||
Sbjct: 527 cacaagt-----ga-------a--tgcacacaggtgtgtgcacacaagtgaatgcacaca 482
Query: 358 ggtgtgtgcacacaagtgaatgcacacaggtgtgtgcacacaagtgaatgcacacaggtg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtgtgtgcacacaagtgaatgcacacaggtgtgtgcacacaagtgaatgcacacaggtg 422
Query: 418 tgtgcatccacatttagctttcccattcttccagaggtgcataagcgcaggtgtgtccat 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgcatccacatttagctttcccattcttccagaggtgcataagcgcaggtgtgtccac 362
Query: 478 gcaggtggatgagcacaggtgtgtgcatccaccacatttaacgttcccattcttccagga 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaggtggatgagcacaggtgtgtgcatccaccacatttaacgttcccattcttccaggg 302
Query: 538 gtgaatgtaccttaaggaacagtttattttgtctcacagctctagggttcaatctaccac 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgaatgtaccttaaggaacagtttattttgtctcacagctctagggttcaatctaccac 242
Query: 598 aaccgagaggttatgga 614
|||||||||||||||||
Sbjct: 241 aaccgagaggttatgga 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 81
Number of extensions: 8
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
