Query= MSMg01no477_e21.b1 MSMg01no477_e21.b1 CHROMAT_FILE:
MSMg01no477_e21.b1 PHD_FILE: MSMg01no477_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:42 2005
(604 letters)
>mm_chr15_28748589_28749592
Length = 1004
Score = 1106 bits (572), Expect = 0.0
Identities = 596/604 (98%)
Strand = Plus / Plus
Query: 1 ttcacaataatgaaacaaaacaccagaccaaggttagtacttcagttttaaattctcatt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacaataacgaaacaaaacaccagaccaaggttagtacttcagttttaaattctcatt 260
Query: 61 acttatgacgacagaatgaacaagtattatatggaacatctgttgtaagtatttctctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttatgacgacagaatgaacaagtattatatggaacatctgttgtaagtatttctctac 320
Query: 121 taggcttctgtgcacacattttacatagattagggtttaaaccaaggcctcttcatgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggcttctgtgcacacattttacatagattagggtttaaaccaaggcctcttcatgtat 380
Query: 181 atcatgtttgttctatatgtgttaaatctacatactgtaaattatcttaaaataactgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcatgtttgttctatatgtgttaaatctacatactgtaaattatcttaaaataactgga 440
Query: 241 gattgttatttatgtttttgttaaaaatcagaaacgttgttgggtttcttgtcacacacc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 aattgttatttatgtttttgttaaaaatcagaaacgttgttgggtttcttgtcacgcacc 500
Query: 301 attaaccaaacacttgagagagaggcaggtatatctctgtgaggtgagatcattctagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attaaccaaacacttgagagagaggcaggtatatctctgtgaggtgagatcattctagtt 560
Query: 361 tatgtagcaagtactaagccaagagcctgtaaaactgaagtaaaacattaatttcacttt 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgtagcaagtactaagccaagatcctgtaaaactgaagtaaaacattaatttcacttt 620
Query: 421 cttatatatgctttatggcttataaatcattggttcacaatagaaactaaaaaaagaaca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 cttatatatgctttatggcttataaatcattggttcacaatagaaactaaaaaaggaaca 680
Query: 481 ttcgagagaaattattcatggcaagtagcctgataatctagacagccaacagccaacctt 540
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 tttgagagaaattattcatggcaagtagcctgataatttagacagccaacagccaacctt 740
Query: 541 tgtgaatttataactcatttattatttgtgagaccacaatcattgtatatttgagcaaat 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 741 tgtgaatttataactcatttattatttgtgagaccacaatcattgtatatctgagcaaat 800
Query: 601 gaga 604
||||
Sbjct: 801 gaga 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_e21.g1 MSMg01no477_e21.g1 CHROMAT_FILE:
MSMg01no477_e21.g1 PHD_FILE: MSMg01no477_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:42 2005
(542 letters)
>mm_chr18_66148027_66148971
Length = 945
Score = 930 bits (481), Expect = 0.0
Identities = 528/545 (96%), Gaps = 3/545 (0%)
Strand = Plus / Minus
Query: 1 atctaaaaagagccagtattgctgatagaaagtcaagatgggaacccttctcacagagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atctaaaaagagccagtattgctgatagaaagtcaagatgggaacccttctcacagagcg 686
Query: 61 tcaatacgagtgggaaagtctgctgttaggggaggtttgagcaggaaaggattgcaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcaatacgagtgggaaagtctgctgttaggggaggtttgagcaggaaaggattgcaggag 626
Query: 121 agtcagatattgaggaggggtgtcattggacttggcctttgctctagtccgaagataggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtcagatattgaggaggggtgtcattggacttggcctttgctctagtccgaagataggg 566
Query: 181 agactaaaggctcttatctgtggcaagggtcacatctagaaagggcattatacagacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 agactaaaggctcttatctgtggcaagggtcacatctagaaagggcattatgcagacagg 506
Query: 241 cttattgttgaaggatgttttcagggaaaggaaaggaccaagagagatgaaggaaaagga 300
|||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 cttacagttgaaggatattttcagggaaaggaaaggaccaagagagatggaggaaaagga 446
Query: 301 ggaaataaagtcagaaagatggtaaagactcagtgttttatctatcttggaaaattacaa 360
|| | |||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct: 445 ggcagtaaagttagaaagatggtaaagactcagtgttttatctaccttgggaaattacca 386
Query: 361 ggcttggggcacttcatgt---cggtgataatcacacgatgacttgccaggcaagctttg 417
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcttgaggcacttcatgttgtcggtgataatcacacgatgacttgccaggcaagctttg 326
Query: 418 gaactacccctagctaaagccccttcgttattgtcaggtgcgttcgtcctttcccacaaa 477
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 gaactacccctagctaaagccccttcgttattgtcaggtgtgttcgtcctttcccacaaa 266
Query: 478 caagtctgtgacagttcctccgtggttggagctgcttcttgctatgcggtcactcatcca 537
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 caagtctgtgacagttcctccgtagttggagctgcttcttgctatgcggtcactcatcca 206
Query: 538 ctggg 542
|||||
Sbjct: 205 ctggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 945
Length adjustment: 10
Effective length of query: 532
Effective length of database: 935
Effective search space: 497420
Effective search space used: 497420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
